Protein–RNA interactions for Protein: Q9P219

CCDC88C, Protein Daple, humanhuman

Predictions only

Length 2,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88CQ9P219 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC14.05□□□□□ -0.16
CCDC88CQ9P219 AC104982.3-201ENST00000581995 514 ntBASIC14.05□□□□□ -0.16
CCDC88CQ9P219 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC14.05□□□□□ -0.16
CCDC88CQ9P219 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC14.05□□□□□ -0.16
CCDC88CQ9P219 NEK9-201ENST00000238616 8310 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CCDC88CQ9P219 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
CCDC88CQ9P219 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
CCDC88CQ9P219 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC14.05□□□□□ -0.16
CCDC88CQ9P219 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC14.05□□□□□ -0.16
CCDC88CQ9P219 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CCDC88CQ9P219 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CCDC88CQ9P219 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CCDC88CQ9P219 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CCDC88CQ9P219 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CCDC88CQ9P219 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
CCDC88CQ9P219 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CCDC88CQ9P219 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
CCDC88CQ9P219 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC14.05□□□□□ -0.16
CCDC88CQ9P219 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC14.05□□□□□ -0.16
CCDC88CQ9P219 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC14.05□□□□□ -0.16
CCDC88CQ9P219 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
CCDC88CQ9P219 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CCDC88CQ9P219 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC14.05□□□□□ -0.16
CCDC88CQ9P219 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
CCDC88CQ9P219 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CCDC88CQ9P219 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CCDC88CQ9P219 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
CCDC88CQ9P219 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC14.05□□□□□ -0.16
CCDC88CQ9P219 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CCDC88CQ9P219 AC132192.2-201ENST00000596206 1147 ntBASIC14.05□□□□□ -0.16
CCDC88CQ9P219 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CCDC88CQ9P219 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CCDC88CQ9P219 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC14.05□□□□□ -0.16
CCDC88CQ9P219 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC14.05□□□□□ -0.16
CCDC88CQ9P219 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
CCDC88CQ9P219 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CCDC88CQ9P219 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CCDC88CQ9P219 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
CCDC88CQ9P219 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CCDC88CQ9P219 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
CCDC88CQ9P219 AC003102.2-201ENST00000589195 1469 ntBASIC14.04□□□□□ -0.16
CCDC88CQ9P219 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
CCDC88CQ9P219 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
CCDC88CQ9P219 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC14.04□□□□□ -0.16
CCDC88CQ9P219 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC14.04□□□□□ -0.16
CCDC88CQ9P219 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CCDC88CQ9P219 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
CCDC88CQ9P219 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
CCDC88CQ9P219 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CCDC88CQ9P219 RBM38-204ENST00000371219 760 ntTSL 2 BASIC14.04□□□□□ -0.16
CCDC88CQ9P219 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CCDC88CQ9P219 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CCDC88CQ9P219 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC14.04□□□□□ -0.16
CCDC88CQ9P219 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC14.04□□□□□ -0.16
CCDC88CQ9P219 HIST2H2BC-201ENST00000498492 580 ntBASIC14.04□□□□□ -0.16
CCDC88CQ9P219 ALG3P1-201ENST00000508806 1114 ntBASIC14.04□□□□□ -0.16
CCDC88CQ9P219 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC14.04□□□□□ -0.16
CCDC88CQ9P219 AC138649.2-201ENST00000615886 705 ntBASIC14.04□□□□□ -0.16
CCDC88CQ9P219 AC091544.8-201ENST00000619490 361 ntBASIC14.04□□□□□ -0.16
CCDC88CQ9P219 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
CCDC88CQ9P219 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CCDC88CQ9P219 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC14.04□□□□□ -0.16
CCDC88CQ9P219 MX1-218ENST00000619682 1980 ntTSL 5 BASIC14.04□□□□□ -0.16
CCDC88CQ9P219 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CCDC88CQ9P219 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CCDC88CQ9P219 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC14.04□□□□□ -0.16
CCDC88CQ9P219 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CCDC88CQ9P219 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC14.04□□□□□ -0.16
CCDC88CQ9P219 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
CCDC88CQ9P219 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
CCDC88CQ9P219 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CCDC88CQ9P219 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC14.04□□□□□ -0.16
CCDC88CQ9P219 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CCDC88CQ9P219 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CCDC88CQ9P219 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CCDC88CQ9P219 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC14.04□□□□□ -0.16
CCDC88CQ9P219 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC14.04□□□□□ -0.16
CCDC88CQ9P219 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CCDC88CQ9P219 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CCDC88CQ9P219 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CCDC88CQ9P219 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC14.03□□□□□ -0.16
CCDC88CQ9P219 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
CCDC88CQ9P219 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC14.03□□□□□ -0.16
CCDC88CQ9P219 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CCDC88CQ9P219 ADM-202ENST00000524948 584 ntTSL 2 BASIC14.03□□□□□ -0.16
CCDC88CQ9P219 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC14.03□□□□□ -0.16
CCDC88CQ9P219 DIO1-215ENST00000610607 796 ntTSL 5 BASIC14.03□□□□□ -0.16
CCDC88CQ9P219 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
CCDC88CQ9P219 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC14.03□□□□□ -0.16
CCDC88CQ9P219 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CCDC88CQ9P219 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CCDC88CQ9P219 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CCDC88CQ9P219 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
CCDC88CQ9P219 AL928921.2-201ENST00000641325 2442 ntBASIC14.03□□□□□ -0.16
CCDC88CQ9P219 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CCDC88CQ9P219 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CCDC88CQ9P219 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
CCDC88CQ9P219 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CCDC88CQ9P219 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
CCDC88CQ9P219 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC14.03□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms