Protein–RNA interactions for Protein: Q9BQE3

TUBA1C, Tubulin alpha-1C chain, humanhuman

Predictions only

Length 449 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1CQ9BQE3 AL162274.1-201ENST00000617191 1098 ntBASIC13.99□□□□□ -0.17
TUBA1CQ9BQE3 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
TUBA1CQ9BQE3 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC13.99□□□□□ -0.17
TUBA1CQ9BQE3 ABBA01031660.1-201ENST00000635219 756 ntBASIC13.99□□□□□ -0.17
TUBA1CQ9BQE3 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
TUBA1CQ9BQE3 PIK3R5-216ENST00000584803 2653 ntAPPRIS ALT1 TSL 5 BASIC13.99□□□□□ -0.17
TUBA1CQ9BQE3 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC13.99□□□□□ -0.17
TUBA1CQ9BQE3 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
TUBA1CQ9BQE3 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
TUBA1CQ9BQE3 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
TUBA1CQ9BQE3 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TUBA1CQ9BQE3 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
TUBA1CQ9BQE3 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
TUBA1CQ9BQE3 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC13.99□□□□□ -0.17
TUBA1CQ9BQE3 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
TUBA1CQ9BQE3 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC13.99□□□□□ -0.17
TUBA1CQ9BQE3 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
TUBA1CQ9BQE3 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
TUBA1CQ9BQE3 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC13.99□□□□□ -0.17
TUBA1CQ9BQE3 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
TUBA1CQ9BQE3 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC13.99□□□□□ -0.17
TUBA1CQ9BQE3 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
TUBA1CQ9BQE3 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TUBA1CQ9BQE3 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
TUBA1CQ9BQE3 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
TUBA1CQ9BQE3 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC13.98□□□□□ -0.17
TUBA1CQ9BQE3 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC13.98□□□□□ -0.17
TUBA1CQ9BQE3 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TUBA1CQ9BQE3 BRSK2-207ENST00000528710 3528 ntTSL 2 BASIC13.98□□□□□ -0.17
TUBA1CQ9BQE3 RPS6KA2-204ENST00000481261 2297 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
TUBA1CQ9BQE3 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TUBA1CQ9BQE3 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
TUBA1CQ9BQE3 AC114271.1-201ENST00000612689 2813 ntBASIC13.98□□□□□ -0.17
TUBA1CQ9BQE3 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC13.98□□□□□ -0.17
TUBA1CQ9BQE3 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC13.98□□□□□ -0.17
TUBA1CQ9BQE3 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TUBA1CQ9BQE3 INE2-201ENST00000630399 1874 ntBASIC13.98□□□□□ -0.17
TUBA1CQ9BQE3 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TUBA1CQ9BQE3 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC13.98□□□□□ -0.17
TUBA1CQ9BQE3 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TUBA1CQ9BQE3 KIF3A-201ENST00000378735 3266 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TUBA1CQ9BQE3 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC13.98□□□□□ -0.17
TUBA1CQ9BQE3 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC13.98□□□□□ -0.17
TUBA1CQ9BQE3 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
TUBA1CQ9BQE3 SOCS2P1-201ENST00000417727 557 ntBASIC13.98□□□□□ -0.17
TUBA1CQ9BQE3 ARSEP1-201ENST00000420443 635 ntBASIC13.98□□□□□ -0.17
TUBA1CQ9BQE3 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC13.98□□□□□ -0.17
TUBA1CQ9BQE3 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC13.98□□□□□ -0.17
TUBA1CQ9BQE3 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC13.98□□□□□ -0.17
TUBA1CQ9BQE3 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
TUBA1CQ9BQE3 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC13.98□□□□□ -0.17
TUBA1CQ9BQE3 AC124283.3-201ENST00000570869 594 ntBASIC13.98□□□□□ -0.17
TUBA1CQ9BQE3 AC015910.1-201ENST00000579400 975 ntBASIC13.98□□□□□ -0.17
TUBA1CQ9BQE3 PIGL-212ENST00000581006 554 ntTSL 4 BASIC13.98□□□□□ -0.17
TUBA1CQ9BQE3 AC008735.3-201ENST00000596646 500 ntBASIC13.98□□□□□ -0.17
TUBA1CQ9BQE3 RPSAP52-203ENST00000622976 1023 ntBASIC13.98□□□□□ -0.17
TUBA1CQ9BQE3 TP73-207ENST00000378290 1831 ntTSL 2 BASIC13.98□□□□□ -0.17
TUBA1CQ9BQE3 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
TUBA1CQ9BQE3 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TUBA1CQ9BQE3 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TUBA1CQ9BQE3 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC13.98□□□□□ -0.17
TUBA1CQ9BQE3 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC13.98□□□□□ -0.17
TUBA1CQ9BQE3 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC13.98□□□□□ -0.17
TUBA1CQ9BQE3 MICB-202ENST00000399150 2346 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
TUBA1CQ9BQE3 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
TUBA1CQ9BQE3 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
TUBA1CQ9BQE3 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
TUBA1CQ9BQE3 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
TUBA1CQ9BQE3 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TUBA1CQ9BQE3 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TUBA1CQ9BQE3 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC13.98□□□□□ -0.17
TUBA1CQ9BQE3 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC13.98□□□□□ -0.17
TUBA1CQ9BQE3 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC13.98□□□□□ -0.17
TUBA1CQ9BQE3 HFE-202ENST00000317896 1922 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
TUBA1CQ9BQE3 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TUBA1CQ9BQE3 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
TUBA1CQ9BQE3 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
TUBA1CQ9BQE3 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
TUBA1CQ9BQE3 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TUBA1CQ9BQE3 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TUBA1CQ9BQE3 APOB-202ENST00000399256 3128 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
TUBA1CQ9BQE3 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TUBA1CQ9BQE3 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
TUBA1CQ9BQE3 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
TUBA1CQ9BQE3 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TUBA1CQ9BQE3 CATSPERE-201ENST00000366531 3038 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
TUBA1CQ9BQE3 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TUBA1CQ9BQE3 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
TUBA1CQ9BQE3 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TUBA1CQ9BQE3 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
TUBA1CQ9BQE3 TAS1R3-201ENST00000339381 3433 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
TUBA1CQ9BQE3 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TUBA1CQ9BQE3 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
TUBA1CQ9BQE3 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TUBA1CQ9BQE3 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
TUBA1CQ9BQE3 AL356258.1-201ENST00000605929 2246 ntTSL 2 BASIC13.97□□□□□ -0.17
TUBA1CQ9BQE3 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TUBA1CQ9BQE3 ZNF641-201ENST00000301042 4544 ntTSL 5 BASIC13.97□□□□□ -0.17
TUBA1CQ9BQE3 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
TUBA1CQ9BQE3 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 64.9 ms