Protein–RNA interactions for Protein: P53708

ITGA8, Integrin alpha-8, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA8P53708 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
ITGA8P53708 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
ITGA8P53708 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
ITGA8P53708 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
ITGA8P53708 TCAF1P1-201ENST00000414990 2232 ntBASIC15.16■□□□□ 0.02
ITGA8P53708 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
ITGA8P53708 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC15.16■□□□□ 0.02
ITGA8P53708 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
ITGA8P53708 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
ITGA8P53708 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
ITGA8P53708 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC15.16■□□□□ 0.02
ITGA8P53708 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
ITGA8P53708 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
ITGA8P53708 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
ITGA8P53708 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
ITGA8P53708 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC15.15■□□□□ 0.02
ITGA8P53708 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC15.15■□□□□ 0.02
ITGA8P53708 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC15.15■□□□□ 0.02
ITGA8P53708 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
ITGA8P53708 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
ITGA8P53708 AP5Z1-201ENST00000348624 2901 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
ITGA8P53708 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
ITGA8P53708 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
ITGA8P53708 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
ITGA8P53708 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
ITGA8P53708 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
ITGA8P53708 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
ITGA8P53708 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
ITGA8P53708 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
ITGA8P53708 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
ITGA8P53708 WDR53-203ENST00000429115 683 ntTSL 2 BASIC15.15■□□□□ 0.02
ITGA8P53708 FO681548.1-201ENST00000455617 1132 ntBASIC15.15■□□□□ 0.02
ITGA8P53708 GCOM2-201ENST00000509133 1104 ntBASIC15.15■□□□□ 0.02
ITGA8P53708 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC15.15■□□□□ 0.02
ITGA8P53708 FADS2-205ENST00000517839 469 ntTSL 3 BASIC15.15■□□□□ 0.02
ITGA8P53708 REEP4-207ENST00000523293 913 ntTSL 3 BASIC15.15■□□□□ 0.02
ITGA8P53708 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
ITGA8P53708 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC15.15■□□□□ 0.02
ITGA8P53708 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC15.15■□□□□ 0.02
ITGA8P53708 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC15.15■□□□□ 0.02
ITGA8P53708 AL359711.2-201ENST00000563105 872 ntBASIC15.15■□□□□ 0.02
ITGA8P53708 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
ITGA8P53708 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC15.15■□□□□ 0.02
ITGA8P53708 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC15.15■□□□□ 0.02
ITGA8P53708 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
ITGA8P53708 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
ITGA8P53708 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
ITGA8P53708 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC15.15■□□□□ 0.02
ITGA8P53708 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
ITGA8P53708 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
ITGA8P53708 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
ITGA8P53708 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC15.15■□□□□ 0.02
ITGA8P53708 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
ITGA8P53708 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
ITGA8P53708 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC15.15■□□□□ 0.02
ITGA8P53708 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC15.15■□□□□ 0.02
ITGA8P53708 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC15.15■□□□□ 0.02
ITGA8P53708 CROT-203ENST00000419147 2959 ntTSL 2 BASIC15.15■□□□□ 0.02
ITGA8P53708 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC15.14■□□□□ 0.01
ITGA8P53708 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ITGA8P53708 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ITGA8P53708 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC15.14■□□□□ 0.01
ITGA8P53708 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ITGA8P53708 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
ITGA8P53708 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
ITGA8P53708 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ITGA8P53708 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
ITGA8P53708 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
ITGA8P53708 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
ITGA8P53708 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC15.14■□□□□ 0.01
ITGA8P53708 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ITGA8P53708 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ITGA8P53708 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
ITGA8P53708 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
ITGA8P53708 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ITGA8P53708 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC15.14■□□□□ 0.01
ITGA8P53708 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC15.14■□□□□ 0.01
ITGA8P53708 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ITGA8P53708 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
ITGA8P53708 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
ITGA8P53708 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
ITGA8P53708 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ITGA8P53708 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
ITGA8P53708 RN7SKP230-201ENST00000365642 335 ntBASIC15.14■□□□□ 0.01
ITGA8P53708 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
ITGA8P53708 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
ITGA8P53708 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
ITGA8P53708 AL442647.2-201ENST00000429864 857 ntBASIC15.14■□□□□ 0.01
ITGA8P53708 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC15.14■□□□□ 0.01
ITGA8P53708 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC15.14■□□□□ 0.01
ITGA8P53708 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC15.14■□□□□ 0.01
ITGA8P53708 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC15.14■□□□□ 0.01
ITGA8P53708 TMPRSS11CP-201ENST00000453277 683 ntBASIC15.14■□□□□ 0.01
ITGA8P53708 AC104596.2-201ENST00000512793 793 ntBASIC15.14■□□□□ 0.01
ITGA8P53708 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
ITGA8P53708 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC15.14■□□□□ 0.01
ITGA8P53708 DUT-210ENST00000559935 569 ntTSL 3 BASIC15.14■□□□□ 0.01
ITGA8P53708 AC103988.2-201ENST00000561804 725 ntBASIC15.14■□□□□ 0.01
ITGA8P53708 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
ITGA8P53708 AC008761.3-201ENST00000624803 892 ntBASIC15.14■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms