Protein–RNA interactions for Protein: P49459

UBE2A, Ubiquitin-conjugating enzyme E2 A, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2AP49459 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC9.44□□□□□ -0.9
UBE2AP49459 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC9.44□□□□□ -0.9
UBE2AP49459 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
UBE2AP49459 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC9.44□□□□□ -0.9
UBE2AP49459 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
UBE2AP49459 ARHGAP23P1-201ENST00000562773 1937 ntBASIC9.44□□□□□ -0.9
UBE2AP49459 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
UBE2AP49459 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
UBE2AP49459 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
UBE2AP49459 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC9.44□□□□□ -0.9
UBE2AP49459 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
UBE2AP49459 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
UBE2AP49459 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC9.44□□□□□ -0.9
UBE2AP49459 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
UBE2AP49459 OTUD4-201ENST00000447906 3829 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
UBE2AP49459 AL353608.3-202ENST00000429953 4384 ntTSL 5 BASIC9.44□□□□□ -0.9
UBE2AP49459 RGS6-203ENST00000402788 5400 ntTSL 2 BASIC9.44□□□□□ -0.9
UBE2AP49459 NWD1-206ENST00000552788 6964 ntAPPRIS P5 TSL 5 BASIC9.44□□□□□ -0.9
UBE2AP49459 FAM46A-202ENST00000369754 5664 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
UBE2AP49459 RIN3-201ENST00000216487 3859 ntAPPRIS P2 TSL 1 (best) BASIC9.43□□□□□ -0.9
UBE2AP49459 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC9.43□□□□□ -0.9
UBE2AP49459 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC9.43□□□□□ -0.9
UBE2AP49459 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC9.43□□□□□ -0.9
UBE2AP49459 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC9.43□□□□□ -0.9
UBE2AP49459 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
UBE2AP49459 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC9.43□□□□□ -0.9
UBE2AP49459 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC9.43□□□□□ -0.9
UBE2AP49459 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC9.43□□□□□ -0.9
UBE2AP49459 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC9.43□□□□□ -0.9
UBE2AP49459 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC9.43□□□□□ -0.9
UBE2AP49459 SFMBT2-203ENST00000379713 2402 ntTSL 2 BASIC9.43□□□□□ -0.9
UBE2AP49459 USP35-204ENST00000530267 2419 ntTSL 2 BASIC9.43□□□□□ -0.9
UBE2AP49459 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC9.43□□□□□ -0.9
UBE2AP49459 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
UBE2AP49459 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC9.43□□□□□ -0.9
UBE2AP49459 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
UBE2AP49459 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC9.43□□□□□ -0.9
UBE2AP49459 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC9.43□□□□□ -0.9
UBE2AP49459 LRRN2-201ENST00000367175 5036 ntAPPRIS P1 BASIC9.43□□□□□ -0.9
UBE2AP49459 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
UBE2AP49459 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC9.43□□□□□ -0.9
UBE2AP49459 TENM3-204ENST00000511685 10896 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
UBE2AP49459 FBXW8-202ENST00000455858 4648 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
UBE2AP49459 CLK3P2-201ENST00000427566 1453 ntBASIC9.43□□□□□ -0.9
UBE2AP49459 KIF14-201ENST00000367350 7274 ntAPPRIS P1 TSL 2 BASIC9.43□□□□□ -0.9
UBE2AP49459 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
UBE2AP49459 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
UBE2AP49459 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
UBE2AP49459 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
UBE2AP49459 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
UBE2AP49459 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
UBE2AP49459 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
UBE2AP49459 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC9.43□□□□□ -0.9
UBE2AP49459 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC9.43□□□□□ -0.9
UBE2AP49459 VDAC1P7-201ENST00000462417 847 ntBASIC9.43□□□□□ -0.9
UBE2AP49459 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC9.43□□□□□ -0.9
UBE2AP49459 AC004890.2-204ENST00000481968 304 ntBASIC9.43□□□□□ -0.9
UBE2AP49459 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC9.43□□□□□ -0.9
UBE2AP49459 AC093004.1-201ENST00000508850 424 ntBASIC9.43□□□□□ -0.9
UBE2AP49459 SPDYE18-201ENST00000510091 1050 ntBASIC9.43□□□□□ -0.9
UBE2AP49459 GLI4-203ENST00000517468 963 ntTSL 5 BASIC9.43□□□□□ -0.9
UBE2AP49459 REEP4-207ENST00000523293 913 ntTSL 3 BASIC9.43□□□□□ -0.9
UBE2AP49459 FTH1-202ENST00000526640 786 ntTSL 2 BASIC9.43□□□□□ -0.9
UBE2AP49459 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC9.43□□□□□ -0.9
UBE2AP49459 AC055876.2-201ENST00000531834 546 ntBASIC9.43□□□□□ -0.9
UBE2AP49459 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC9.43□□□□□ -0.9
UBE2AP49459 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC9.43□□□□□ -0.9
UBE2AP49459 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC9.43□□□□□ -0.9
UBE2AP49459 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC9.43□□□□□ -0.9
UBE2AP49459 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC9.43□□□□□ -0.9
UBE2AP49459 AC107373.2-201ENST00000607735 490 ntBASIC9.43□□□□□ -0.9
UBE2AP49459 AC004233.3-201ENST00000607794 1269 ntBASIC9.43□□□□□ -0.9
UBE2AP49459 AC009118.2-201ENST00000613275 655 ntBASIC9.43□□□□□ -0.9
UBE2AP49459 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
UBE2AP49459 BX539320.1-201ENST00000623759 877 ntBASIC9.43□□□□□ -0.9
UBE2AP49459 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC9.43□□□□□ -0.9
UBE2AP49459 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
UBE2AP49459 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC9.43□□□□□ -0.9
UBE2AP49459 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC9.43□□□□□ -0.9
UBE2AP49459 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
UBE2AP49459 CCDC88A-207ENST00000436346 9811 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
UBE2AP49459 CCDC92-208ENST00000545135 4883 ntAPPRIS P1 TSL 2 BASIC9.43□□□□□ -0.9
UBE2AP49459 DYSF-202ENST00000394120 6543 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
UBE2AP49459 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC9.43□□□□□ -0.9
UBE2AP49459 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC9.43□□□□□ -0.9
UBE2AP49459 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC9.43□□□□□ -0.9
UBE2AP49459 PRICKLE1-203ENST00000455697 4277 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
UBE2AP49459 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC9.43□□□□□ -0.9
UBE2AP49459 AC125611.4-201ENST00000553259 4166 ntTSL 2 BASIC9.43□□□□□ -0.9
UBE2AP49459 NFKBIZ-202ENST00000326172 3923 ntAPPRIS P3 TSL 1 (best) BASIC9.43□□□□□ -0.9
UBE2AP49459 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC9.43□□□□□ -0.9
UBE2AP49459 RBM12-202ENST00000374104 5213 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
UBE2AP49459 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC9.43□□□□□ -0.9
UBE2AP49459 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC9.43□□□□□ -0.9
UBE2AP49459 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
UBE2AP49459 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
UBE2AP49459 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC9.43□□□□□ -0.9
UBE2AP49459 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
UBE2AP49459 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
UBE2AP49459 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC9.43□□□□□ -0.9
Retrieved 100 of 98,524 protein–RNA pairs in 70 ms