Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
RAB40ALP0C0E4 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RAB40ALP0C0E4 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC13.89□□□□□ -0.19
RAB40ALP0C0E4 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
RAB40ALP0C0E4 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RAB40ALP0C0E4 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RAB40ALP0C0E4 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RAB40ALP0C0E4 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
RAB40ALP0C0E4 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
RAB40ALP0C0E4 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
RAB40ALP0C0E4 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RAB40ALP0C0E4 ACTG1P2-201ENST00000415776 1125 ntBASIC13.89□□□□□ -0.19
RAB40ALP0C0E4 ACTG1P11-201ENST00000425411 1125 ntBASIC13.89□□□□□ -0.19
RAB40ALP0C0E4 AL591684.1-201ENST00000434533 234 ntTSL 5 BASIC13.89□□□□□ -0.19
RAB40ALP0C0E4 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC13.89□□□□□ -0.19
RAB40ALP0C0E4 KLF2P1-201ENST00000447438 1042 ntBASIC13.89□□□□□ -0.19
RAB40ALP0C0E4 AL353637.1-201ENST00000451571 732 ntBASIC13.89□□□□□ -0.19
RAB40ALP0C0E4 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC13.89□□□□□ -0.19
RAB40ALP0C0E4 AC012618.1-201ENST00000461223 412 ntBASIC13.89□□□□□ -0.19
RAB40ALP0C0E4 FADS2-212ENST00000522639 360 ntTSL 5 BASIC13.89□□□□□ -0.19
RAB40ALP0C0E4 CCNC-217ENST00000523985 958 ntTSL 2 BASIC13.89□□□□□ -0.19
RAB40ALP0C0E4 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC13.89□□□□□ -0.19
RAB40ALP0C0E4 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC13.89□□□□□ -0.19
RAB40ALP0C0E4 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC13.89□□□□□ -0.19
RAB40ALP0C0E4 FADS2-215ENST00000574708 385 ntTSL 3 BASIC13.89□□□□□ -0.19
RAB40ALP0C0E4 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC13.89□□□□□ -0.19
RAB40ALP0C0E4 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RAB40ALP0C0E4 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RAB40ALP0C0E4 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
RAB40ALP0C0E4 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
RAB40ALP0C0E4 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC13.89□□□□□ -0.19
RAB40ALP0C0E4 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC13.89□□□□□ -0.19
RAB40ALP0C0E4 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RAB40ALP0C0E4 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RAB40ALP0C0E4 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC13.89□□□□□ -0.19
RAB40ALP0C0E4 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC13.89□□□□□ -0.19
RAB40ALP0C0E4 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC13.89□□□□□ -0.19
RAB40ALP0C0E4 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC13.89□□□□□ -0.19
RAB40ALP0C0E4 GSN-215ENST00000545652 2428 ntTSL 2 BASIC13.89□□□□□ -0.19
RAB40ALP0C0E4 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
RAB40ALP0C0E4 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RAB40ALP0C0E4 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RAB40ALP0C0E4 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC13.88□□□□□ -0.19
RAB40ALP0C0E4 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC13.88□□□□□ -0.19
RAB40ALP0C0E4 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC13.88□□□□□ -0.19
RAB40ALP0C0E4 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
RAB40ALP0C0E4 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
RAB40ALP0C0E4 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC13.88□□□□□ -0.19
RAB40ALP0C0E4 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC13.88□□□□□ -0.19
RAB40ALP0C0E4 AC091951.1-201ENST00000512854 2465 ntBASIC13.88□□□□□ -0.19
RAB40ALP0C0E4 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
RAB40ALP0C0E4 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
RAB40ALP0C0E4 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
RAB40ALP0C0E4 FAM90A7P-201ENST00000382628 1395 ntBASIC13.88□□□□□ -0.19
RAB40ALP0C0E4 FAM90A23P-201ENST00000400136 1395 ntBASIC13.88□□□□□ -0.19
RAB40ALP0C0E4 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RAB40ALP0C0E4 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RAB40ALP0C0E4 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
RAB40ALP0C0E4 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
RAB40ALP0C0E4 HLA-DQB2-229ENST00000411527 1059 ntBASIC13.88□□□□□ -0.19
RAB40ALP0C0E4 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC13.88□□□□□ -0.19
RAB40ALP0C0E4 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
RAB40ALP0C0E4 RCC2P8-201ENST00000502779 1035 ntBASIC13.88□□□□□ -0.19
RAB40ALP0C0E4 NUP210P1-202ENST00000504322 710 ntBASIC13.88□□□□□ -0.19
RAB40ALP0C0E4 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC13.88□□□□□ -0.19
RAB40ALP0C0E4 PARP8-218ENST00000513738 596 ntTSL 4 BASIC13.88□□□□□ -0.19
RAB40ALP0C0E4 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC13.88□□□□□ -0.19
RAB40ALP0C0E4 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
RAB40ALP0C0E4 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC13.88□□□□□ -0.19
RAB40ALP0C0E4 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC13.88□□□□□ -0.19
RAB40ALP0C0E4 PAM16-211ENST00000575848 518 ntTSL 3 BASIC13.88□□□□□ -0.19
RAB40ALP0C0E4 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
RAB40ALP0C0E4 RN7SL574P-201ENST00000581512 297 ntBASIC13.88□□□□□ -0.19
RAB40ALP0C0E4 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC13.88□□□□□ -0.19
RAB40ALP0C0E4 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RAB40ALP0C0E4 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RAB40ALP0C0E4 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RAB40ALP0C0E4 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC13.88□□□□□ -0.19
RAB40ALP0C0E4 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
RAB40ALP0C0E4 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC13.88□□□□□ -0.19
RAB40ALP0C0E4 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RAB40ALP0C0E4 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
RAB40ALP0C0E4 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
RAB40ALP0C0E4 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
RAB40ALP0C0E4 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RAB40ALP0C0E4 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RAB40ALP0C0E4 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC13.88□□□□□ -0.19
RAB40ALP0C0E4 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
RAB40ALP0C0E4 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC13.88□□□□□ -0.19
RAB40ALP0C0E4 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC13.88□□□□□ -0.19
RAB40ALP0C0E4 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
RAB40ALP0C0E4 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
RAB40ALP0C0E4 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RAB40ALP0C0E4 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
RAB40ALP0C0E4 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
RAB40ALP0C0E4 REXO1L2P-201ENST00000425429 2069 ntBASIC13.87□□□□□ -0.19
RAB40ALP0C0E4 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RAB40ALP0C0E4 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
RAB40ALP0C0E4 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC13.87□□□□□ -0.19
RAB40ALP0C0E4 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms