Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 TREML5P-201ENST00000421694 576 ntBASIC13.15□□□□□ -0.3
RFT1Q96AA3 AC107890.1-201ENST00000422478 521 ntBASIC13.15□□□□□ -0.3
RFT1Q96AA3 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC13.15□□□□□ -0.3
RFT1Q96AA3 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC13.15□□□□□ -0.3
RFT1Q96AA3 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC13.15□□□□□ -0.3
RFT1Q96AA3 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC13.15□□□□□ -0.3
RFT1Q96AA3 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC13.15□□□□□ -0.3
RFT1Q96AA3 AC025678.2-201ENST00000562061 970 ntBASIC13.15□□□□□ -0.3
RFT1Q96AA3 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC13.15□□□□□ -0.3
RFT1Q96AA3 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC13.15□□□□□ -0.3
RFT1Q96AA3 AL691403.2-201ENST00000618460 490 ntBASIC13.15□□□□□ -0.3
RFT1Q96AA3 AC093028.1-201ENST00000622998 982 ntBASIC13.15□□□□□ -0.3
RFT1Q96AA3 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC13.15□□□□□ -0.3
RFT1Q96AA3 GPR88-201ENST00000315033 3491 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RFT1Q96AA3 STRA6-203ENST00000416286 2750 ntTSL 5 BASIC13.15□□□□□ -0.3
RFT1Q96AA3 ANKRD20A19P-202ENST00000442969 2796 ntTSL 2 BASIC13.15□□□□□ -0.3
RFT1Q96AA3 MED14-201ENST00000324817 7984 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RFT1Q96AA3 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
RFT1Q96AA3 MAP7-202ENST00000432797 4375 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
RFT1Q96AA3 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
RFT1Q96AA3 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC13.15□□□□□ -0.3
RFT1Q96AA3 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
RFT1Q96AA3 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
RFT1Q96AA3 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
RFT1Q96AA3 ADAMTS13-202ENST00000356589 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
RFT1Q96AA3 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
RFT1Q96AA3 LMBRD2-201ENST00000296603 8185 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RFT1Q96AA3 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
RFT1Q96AA3 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
RFT1Q96AA3 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
RFT1Q96AA3 PES1-204ENST00000402284 2144 ntTSL 5 BASIC13.15□□□□□ -0.3
RFT1Q96AA3 ALAS1-204ENST00000469224 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RFT1Q96AA3 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.31
RFT1Q96AA3 PARP1-203ENST00000366794 3958 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
RFT1Q96AA3 AL354702.1-201ENST00000442006 1960 ntBASIC13.14□□□□□ -0.31
RFT1Q96AA3 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
RFT1Q96AA3 SOGA3-207ENST00000481848 11464 ntAPPRIS P5 TSL 5 BASIC13.14□□□□□ -0.31
RFT1Q96AA3 LINC01792-201ENST00000452787 2050 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
RFT1Q96AA3 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC13.14□□□□□ -0.31
RFT1Q96AA3 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
RFT1Q96AA3 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC13.14□□□□□ -0.31
RFT1Q96AA3 AC083964.2-201ENST00000623988 2396 ntBASIC13.14□□□□□ -0.31
RFT1Q96AA3 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
RFT1Q96AA3 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC13.14□□□□□ -0.31
RFT1Q96AA3 SPOCD1-201ENST00000257100 2472 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
RFT1Q96AA3 AC090505.1-201ENST00000430515 1834 ntBASIC13.14□□□□□ -0.31
RFT1Q96AA3 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC13.14□□□□□ -0.31
RFT1Q96AA3 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
RFT1Q96AA3 C11orf87-201ENST00000327419 5884 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
RFT1Q96AA3 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
RFT1Q96AA3 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
RFT1Q96AA3 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC13.14□□□□□ -0.31
RFT1Q96AA3 PDE1C-205ENST00000396191 2952 ntAPPRIS ALT1 TSL 2 BASIC13.14□□□□□ -0.31
RFT1Q96AA3 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
RFT1Q96AA3 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
RFT1Q96AA3 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC13.14□□□□□ -0.31
RFT1Q96AA3 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC13.14□□□□□ -0.31
RFT1Q96AA3 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
RFT1Q96AA3 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
RFT1Q96AA3 IGHV3-42-201ENST00000520410 361 ntBASIC13.14□□□□□ -0.31
RFT1Q96AA3 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC13.14□□□□□ -0.31
RFT1Q96AA3 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC13.14□□□□□ -0.31
RFT1Q96AA3 RAB35-202ENST00000534951 939 ntTSL 2 BASIC13.14□□□□□ -0.31
RFT1Q96AA3 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC13.14□□□□□ -0.31
RFT1Q96AA3 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC13.14□□□□□ -0.31
RFT1Q96AA3 MPI-209ENST00000564003 1195 ntTSL 2 BASIC13.14□□□□□ -0.31
RFT1Q96AA3 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC13.14□□□□□ -0.31
RFT1Q96AA3 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC13.14□□□□□ -0.31
RFT1Q96AA3 GPR39-203ENST00000622084 900 ntTSL 5 BASIC13.14□□□□□ -0.31
RFT1Q96AA3 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
RFT1Q96AA3 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
RFT1Q96AA3 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
RFT1Q96AA3 SFMBT2-204ENST00000397167 8024 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
RFT1Q96AA3 AC020658.7-201ENST00000624274 2442 ntBASIC13.14□□□□□ -0.31
RFT1Q96AA3 AC093668.2-201ENST00000481893 3569 ntTSL 2 BASIC13.14□□□□□ -0.31
RFT1Q96AA3 AC105052.1-201ENST00000519541 3569 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
RFT1Q96AA3 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
RFT1Q96AA3 WIZ-202ENST00000389282 4067 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
RFT1Q96AA3 AC019294.4-201ENST00000561777 2905 ntBASIC13.14□□□□□ -0.31
RFT1Q96AA3 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
RFT1Q96AA3 TRAPPC10-201ENST00000291574 6976 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
RFT1Q96AA3 AL157414.3-201ENST00000624276 1954 ntBASIC13.14□□□□□ -0.31
RFT1Q96AA3 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
RFT1Q96AA3 CD99L2-208ENST00000613030 3742 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
RFT1Q96AA3 TBC1D9B-208ENST00000519746 2755 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
RFT1Q96AA3 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
RFT1Q96AA3 PSIP1-203ENST00000380733 3391 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
RFT1Q96AA3 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
RFT1Q96AA3 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
RFT1Q96AA3 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
RFT1Q96AA3 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
RFT1Q96AA3 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC13.13□□□□□ -0.31
RFT1Q96AA3 TCAM1P-207ENST00000485295 1537 ntBASIC13.13□□□□□ -0.31
RFT1Q96AA3 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
RFT1Q96AA3 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC13.13□□□□□ -0.31
RFT1Q96AA3 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
RFT1Q96AA3 KARS-201ENST00000302445 2005 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
RFT1Q96AA3 AL356258.1-201ENST00000605929 2246 ntTSL 2 BASIC13.13□□□□□ -0.31
RFT1Q96AA3 ADGRG6-204ENST00000367609 6887 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
RFT1Q96AA3 KLHL34-201ENST00000379499 3641 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms