Protein–RNA interactions for Protein: Q93038

TNFRSF25, Tumor necrosis factor receptor superfamily member 25, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF25Q93038 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC16.59■□□□□ 0.25
TNFRSF25Q93038 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
TNFRSF25Q93038 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TNFRSF25Q93038 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TNFRSF25Q93038 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC16.59■□□□□ 0.25
TNFRSF25Q93038 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC16.59■□□□□ 0.25
TNFRSF25Q93038 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TNFRSF25Q93038 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TNFRSF25Q93038 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC16.59■□□□□ 0.25
TNFRSF25Q93038 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC16.59■□□□□ 0.25
TNFRSF25Q93038 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
TNFRSF25Q93038 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
TNFRSF25Q93038 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
TNFRSF25Q93038 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
TNFRSF25Q93038 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC16.58■□□□□ 0.25
TNFRSF25Q93038 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
TNFRSF25Q93038 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
TNFRSF25Q93038 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC16.58■□□□□ 0.25
TNFRSF25Q93038 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
TNFRSF25Q93038 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.25
TNFRSF25Q93038 CDC42SE2-202ENST00000395246 3485 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
TNFRSF25Q93038 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC16.58■□□□□ 0.24
TNFRSF25Q93038 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TNFRSF25Q93038 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
TNFRSF25Q93038 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
TNFRSF25Q93038 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TNFRSF25Q93038 POM121L10P-201ENST00000436994 1285 ntBASIC16.58■□□□□ 0.24
TNFRSF25Q93038 OR2R1P-201ENST00000441404 914 ntBASIC16.58■□□□□ 0.24
TNFRSF25Q93038 APOA2-204ENST00000464492 530 ntTSL 3 BASIC16.58■□□□□ 0.24
TNFRSF25Q93038 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC16.58■□□□□ 0.24
TNFRSF25Q93038 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC16.58■□□□□ 0.24
TNFRSF25Q93038 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TNFRSF25Q93038 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC16.58■□□□□ 0.24
TNFRSF25Q93038 AC104982.3-201ENST00000581995 514 ntBASIC16.58■□□□□ 0.24
TNFRSF25Q93038 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC16.58■□□□□ 0.24
TNFRSF25Q93038 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC16.58■□□□□ 0.24
TNFRSF25Q93038 AL008721.1-201ENST00000609964 604 ntBASIC16.58■□□□□ 0.24
TNFRSF25Q93038 AC133540.1-201ENST00000620845 1019 ntBASIC16.58■□□□□ 0.24
TNFRSF25Q93038 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC16.58■□□□□ 0.24
TNFRSF25Q93038 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC16.58■□□□□ 0.24
TNFRSF25Q93038 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TNFRSF25Q93038 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC16.58■□□□□ 0.24
TNFRSF25Q93038 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC16.58■□□□□ 0.24
TNFRSF25Q93038 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
TNFRSF25Q93038 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TNFRSF25Q93038 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TNFRSF25Q93038 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
TNFRSF25Q93038 KRT8P24-201ENST00000560290 1559 ntBASIC16.58■□□□□ 0.24
TNFRSF25Q93038 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TNFRSF25Q93038 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TNFRSF25Q93038 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
TNFRSF25Q93038 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TNFRSF25Q93038 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC16.58■□□□□ 0.24
TNFRSF25Q93038 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC16.58■□□□□ 0.24
TNFRSF25Q93038 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC16.58■□□□□ 0.24
TNFRSF25Q93038 AC011474.4-201ENST00000623523 2076 ntBASIC16.58■□□□□ 0.24
TNFRSF25Q93038 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.24
TNFRSF25Q93038 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TNFRSF25Q93038 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TNFRSF25Q93038 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TNFRSF25Q93038 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
TNFRSF25Q93038 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
TNFRSF25Q93038 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
TNFRSF25Q93038 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TNFRSF25Q93038 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC16.57■□□□□ 0.24
TNFRSF25Q93038 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
TNFRSF25Q93038 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TNFRSF25Q93038 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC16.57■□□□□ 0.24
TNFRSF25Q93038 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC16.57■□□□□ 0.24
TNFRSF25Q93038 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TNFRSF25Q93038 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC16.57■□□□□ 0.24
TNFRSF25Q93038 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TNFRSF25Q93038 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC16.57■□□□□ 0.24
TNFRSF25Q93038 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TNFRSF25Q93038 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TNFRSF25Q93038 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TNFRSF25Q93038 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
TNFRSF25Q93038 AC004899.1-201ENST00000424687 1714 ntBASIC16.57■□□□□ 0.24
TNFRSF25Q93038 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TNFRSF25Q93038 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
TNFRSF25Q93038 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC16.57■□□□□ 0.24
TNFRSF25Q93038 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC16.57■□□□□ 0.24
TNFRSF25Q93038 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TNFRSF25Q93038 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TNFRSF25Q93038 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TNFRSF25Q93038 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
TNFRSF25Q93038 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
TNFRSF25Q93038 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC16.57■□□□□ 0.24
TNFRSF25Q93038 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TNFRSF25Q93038 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC16.57■□□□□ 0.24
TNFRSF25Q93038 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC16.57■□□□□ 0.24
TNFRSF25Q93038 ATP6V0CP2-201ENST00000469409 207 ntBASIC16.57■□□□□ 0.24
TNFRSF25Q93038 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC16.57■□□□□ 0.24
TNFRSF25Q93038 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC16.57■□□□□ 0.24
TNFRSF25Q93038 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC16.57■□□□□ 0.24
TNFRSF25Q93038 AC068587.8-201ENST00000641239 219 ntBASIC16.57■□□□□ 0.24
TNFRSF25Q93038 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC16.57■□□□□ 0.24
TNFRSF25Q93038 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TNFRSF25Q93038 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TNFRSF25Q93038 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms