Protein–RNA interactions for Protein: P58511

SMIM11A, Small integral membrane protein 11A, humanhuman

Predictions only

Length 58 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11AP58511 COL4A1-201ENST00000375820 6532 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SMIM11AP58511 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SMIM11AP58511 AC022144.1-201ENST00000602255 1580 ntBASIC13.65□□□□□ -0.22
SMIM11AP58511 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
SMIM11AP58511 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
SMIM11AP58511 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC13.65□□□□□ -0.22
SMIM11AP58511 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SMIM11AP58511 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC13.65□□□□□ -0.22
SMIM11AP58511 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
SMIM11AP58511 ACAP2-201ENST00000326793 7160 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SMIM11AP58511 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC13.65□□□□□ -0.22
SMIM11AP58511 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SMIM11AP58511 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SMIM11AP58511 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
SMIM11AP58511 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
SMIM11AP58511 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC13.65□□□□□ -0.22
SMIM11AP58511 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
SMIM11AP58511 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
SMIM11AP58511 NAA15-201ENST00000296543 6222 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.23
SMIM11AP58511 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.23
SMIM11AP58511 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SMIM11AP58511 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
SMIM11AP58511 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
SMIM11AP58511 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC13.64□□□□□ -0.23
SMIM11AP58511 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
SMIM11AP58511 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SMIM11AP58511 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
SMIM11AP58511 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
SMIM11AP58511 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
SMIM11AP58511 NAPEPLD-201ENST00000341533 4972 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SMIM11AP58511 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC13.64□□□□□ -0.23
SMIM11AP58511 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
SMIM11AP58511 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC13.64□□□□□ -0.23
SMIM11AP58511 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
SMIM11AP58511 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC13.64□□□□□ -0.23
SMIM11AP58511 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
SMIM11AP58511 C1QBPP1-201ENST00000400117 770 ntBASIC13.64□□□□□ -0.23
SMIM11AP58511 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC13.64□□□□□ -0.23
SMIM11AP58511 KLF2P2-201ENST00000416807 1039 ntBASIC13.64□□□□□ -0.23
SMIM11AP58511 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC13.64□□□□□ -0.23
SMIM11AP58511 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC13.64□□□□□ -0.23
SMIM11AP58511 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC13.64□□□□□ -0.23
SMIM11AP58511 SPDYE18-201ENST00000510091 1050 ntBASIC13.64□□□□□ -0.23
SMIM11AP58511 DOC2GP-202ENST00000514950 1163 ntBASIC13.64□□□□□ -0.23
SMIM11AP58511 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC13.64□□□□□ -0.23
SMIM11AP58511 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC13.64□□□□□ -0.23
SMIM11AP58511 AC131206.1-201ENST00000538078 1211 ntBASIC13.64□□□□□ -0.23
SMIM11AP58511 VPS18-202ENST00000558474 873 ntTSL 3 BASIC13.64□□□□□ -0.23
SMIM11AP58511 IFT20-206ENST00000578122 834 ntTSL 2 BASIC13.64□□□□□ -0.23
SMIM11AP58511 IFT20-208ENST00000578985 831 ntTSL 3 BASIC13.64□□□□□ -0.23
SMIM11AP58511 SPDYE22P-201ENST00000582158 798 ntBASIC13.64□□□□□ -0.23
SMIM11AP58511 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC13.64□□□□□ -0.23
SMIM11AP58511 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC13.64□□□□□ -0.23
SMIM11AP58511 AC008738.7-201ENST00000609744 511 ntBASIC13.64□□□□□ -0.23
SMIM11AP58511 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
SMIM11AP58511 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC13.64□□□□□ -0.23
SMIM11AP58511 BTRC-203ENST00000393441 6084 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
SMIM11AP58511 ACOX1-201ENST00000293217 7514 ntAPPRIS P5 TSL 1 (best) BASIC13.64□□□□□ -0.23
SMIM11AP58511 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SMIM11AP58511 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
SMIM11AP58511 LARP4-201ENST00000293618 6296 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
SMIM11AP58511 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
SMIM11AP58511 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC13.64□□□□□ -0.23
SMIM11AP58511 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SMIM11AP58511 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
SMIM11AP58511 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
SMIM11AP58511 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC13.63□□□□□ -0.23
SMIM11AP58511 HIPK1-205ENST00000369558 8157 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SMIM11AP58511 SELENON-201ENST00000354177 4227 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
SMIM11AP58511 TP73-201ENST00000346387 4854 ntTSL 5 BASIC13.63□□□□□ -0.23
SMIM11AP58511 EIF4G1-219ENST00000435046 4668 ntTSL 5 BASIC13.63□□□□□ -0.23
SMIM11AP58511 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SMIM11AP58511 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
SMIM11AP58511 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SMIM11AP58511 COL20A1-203ENST00000422202 8097 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
SMIM11AP58511 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
SMIM11AP58511 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
SMIM11AP58511 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
SMIM11AP58511 PRDM15-207ENST00000447207 4928 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
SMIM11AP58511 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SMIM11AP58511 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SMIM11AP58511 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SMIM11AP58511 RNU1-114P-201ENST00000365297 166 ntBASIC13.63□□□□□ -0.23
SMIM11AP58511 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
SMIM11AP58511 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC13.63□□□□□ -0.23
SMIM11AP58511 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC13.63□□□□□ -0.23
SMIM11AP58511 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SMIM11AP58511 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
SMIM11AP58511 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC13.63□□□□□ -0.23
SMIM11AP58511 AC004840.1-201ENST00000636359 365 ntBASIC13.63□□□□□ -0.23
SMIM11AP58511 GSN-209ENST00000449733 2702 ntTSL 2 BASIC13.63□□□□□ -0.23
SMIM11AP58511 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
SMIM11AP58511 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
SMIM11AP58511 HPD-204ENST00000543163 1709 ntTSL 5 BASIC13.63□□□□□ -0.23
SMIM11AP58511 GMCL1-201ENST00000282570 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SMIM11AP58511 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
SMIM11AP58511 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC13.63□□□□□ -0.23
SMIM11AP58511 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC13.63□□□□□ -0.23
SMIM11AP58511 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC13.63□□□□□ -0.23
SMIM11AP58511 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms