Protein–RNA interactions for Protein: P55211

CASP9, Caspase-9, humanhuman

Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP9P55211 RPS15-205ENST00000586686 562 ntTSL 5 BASIC14.03□□□□□ -0.16
CASP9P55211 RPS15-208ENST00000591804 711 ntTSL 5 BASIC14.03□□□□□ -0.16
CASP9P55211 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CASP9P55211 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC14.03□□□□□ -0.16
CASP9P55211 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC14.03□□□□□ -0.16
CASP9P55211 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CASP9P55211 HFE2-206ENST00000634927 506 ntTSL 4 BASIC14.03□□□□□ -0.16
CASP9P55211 AC063926.2-201ENST00000623766 1308 ntBASIC14.03□□□□□ -0.16
CASP9P55211 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CASP9P55211 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CASP9P55211 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CASP9P55211 AGER-206ENST00000375070 1463 ntTSL 5 BASIC14.03□□□□□ -0.16
CASP9P55211 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CASP9P55211 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
CASP9P55211 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC14.03□□□□□ -0.16
CASP9P55211 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CASP9P55211 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC14.03□□□□□ -0.16
CASP9P55211 ADK-205ENST00000539909 1866 ntTSL 2 BASIC14.03□□□□□ -0.16
CASP9P55211 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
CASP9P55211 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CASP9P55211 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CASP9P55211 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC14.03□□□□□ -0.16
CASP9P55211 AL122018.1-201ENST00000446607 2310 ntBASIC14.03□□□□□ -0.16
CASP9P55211 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
CASP9P55211 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
CASP9P55211 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC14.03□□□□□ -0.16
CASP9P55211 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
CASP9P55211 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
CASP9P55211 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
CASP9P55211 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CASP9P55211 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC14.02□□□□□ -0.16
CASP9P55211 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
CASP9P55211 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CASP9P55211 RET-205ENST00000615310 4337 ntTSL 5 BASIC14.02□□□□□ -0.16
CASP9P55211 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
CASP9P55211 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CASP9P55211 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
CASP9P55211 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CASP9P55211 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC14.02□□□□□ -0.16
CASP9P55211 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
CASP9P55211 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
CASP9P55211 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
CASP9P55211 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CASP9P55211 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CASP9P55211 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
CASP9P55211 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC14.02□□□□□ -0.16
CASP9P55211 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
CASP9P55211 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CASP9P55211 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CASP9P55211 HNRNPA1P48-201ENST00000562726 1377 ntBASIC14.02□□□□□ -0.17
CASP9P55211 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CASP9P55211 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CASP9P55211 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CASP9P55211 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CASP9P55211 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
CASP9P55211 COPE-202ENST00000349893 948 ntTSL 2 BASIC14.02□□□□□ -0.17
CASP9P55211 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CASP9P55211 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CASP9P55211 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CASP9P55211 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
CASP9P55211 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CASP9P55211 FO681548.1-201ENST00000455617 1132 ntBASIC14.02□□□□□ -0.17
CASP9P55211 OARD1-208ENST00000469104 704 ntTSL 2 BASIC14.02□□□□□ -0.17
CASP9P55211 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC14.02□□□□□ -0.17
CASP9P55211 API5-211ENST00000534695 560 ntTSL 5 BASIC14.02□□□□□ -0.17
CASP9P55211 CLUHP6-201ENST00000580789 941 ntBASIC14.02□□□□□ -0.17
CASP9P55211 RN7SL204P-201ENST00000582831 262 ntBASIC14.02□□□□□ -0.17
CASP9P55211 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC14.02□□□□□ -0.17
CASP9P55211 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC14.02□□□□□ -0.17
CASP9P55211 AC012645.4-201ENST00000610691 1061 ntBASIC14.02□□□□□ -0.17
CASP9P55211 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CASP9P55211 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC14.02□□□□□ -0.17
CASP9P55211 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC14.02□□□□□ -0.17
CASP9P55211 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
CASP9P55211 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
CASP9P55211 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
CASP9P55211 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC14.02□□□□□ -0.17
CASP9P55211 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
CASP9P55211 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
CASP9P55211 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CASP9P55211 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CASP9P55211 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
CASP9P55211 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC14.02□□□□□ -0.17
CASP9P55211 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CASP9P55211 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CASP9P55211 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CASP9P55211 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC14.02□□□□□ -0.17
CASP9P55211 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CASP9P55211 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC14.02□□□□□ -0.17
CASP9P55211 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
CASP9P55211 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CASP9P55211 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
CASP9P55211 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CASP9P55211 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
CASP9P55211 ATP12A-201ENST00000218548 3732 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CASP9P55211 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CASP9P55211 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
CASP9P55211 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
CASP9P55211 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
CASP9P55211 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms