Protein–RNA interactions for Protein: P53007

SLC25A1, Tricarboxylate transport protein, mitochondrial, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC25A1P53007 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
SLC25A1P53007 FOS-202ENST00000535987 1402 ntTSL 2 BASIC13.11□□□□□ -0.31
SLC25A1P53007 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC13.11□□□□□ -0.31
SLC25A1P53007 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC13.11□□□□□ -0.31
SLC25A1P53007 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
SLC25A1P53007 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
SLC25A1P53007 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
SLC25A1P53007 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SLC25A1P53007 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
SLC25A1P53007 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC13.11□□□□□ -0.31
SLC25A1P53007 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC13.11□□□□□ -0.31
SLC25A1P53007 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC13.11□□□□□ -0.31
SLC25A1P53007 TUBB8P4-201ENST00000511806 1324 ntBASIC13.11□□□□□ -0.31
SLC25A1P53007 AC064801.2-201ENST00000625052 1303 ntBASIC13.11□□□□□ -0.31
SLC25A1P53007 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC13.11□□□□□ -0.31
SLC25A1P53007 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
SLC25A1P53007 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC13.11□□□□□ -0.31
SLC25A1P53007 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC13.1□□□□□ -0.31
SLC25A1P53007 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SLC25A1P53007 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
SLC25A1P53007 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
SLC25A1P53007 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
SLC25A1P53007 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC13.1□□□□□ -0.31
SLC25A1P53007 ST20-AS1-201ENST00000560255 4223 ntBASIC13.1□□□□□ -0.31
SLC25A1P53007 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
SLC25A1P53007 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
SLC25A1P53007 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
SLC25A1P53007 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC13.1□□□□□ -0.31
SLC25A1P53007 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
SLC25A1P53007 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
SLC25A1P53007 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC13.1□□□□□ -0.31
SLC25A1P53007 AL138709.1-201ENST00000614840 1693 ntBASIC13.1□□□□□ -0.31
SLC25A1P53007 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
SLC25A1P53007 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SLC25A1P53007 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
SLC25A1P53007 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC13.1□□□□□ -0.31
SLC25A1P53007 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SLC25A1P53007 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC13.1□□□□□ -0.31
SLC25A1P53007 BAATP1-201ENST00000412284 1225 ntBASIC13.1□□□□□ -0.31
SLC25A1P53007 ARSEP1-201ENST00000420443 635 ntBASIC13.1□□□□□ -0.31
SLC25A1P53007 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC13.1□□□□□ -0.31
SLC25A1P53007 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC13.1□□□□□ -0.31
SLC25A1P53007 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
SLC25A1P53007 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC13.1□□□□□ -0.31
SLC25A1P53007 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC13.1□□□□□ -0.31
SLC25A1P53007 CDK4-206ENST00000549606 558 ntTSL 2 BASIC13.1□□□□□ -0.31
SLC25A1P53007 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
SLC25A1P53007 AL033527.5-201ENST00000641382 801 ntBASIC13.1□□□□□ -0.31
SLC25A1P53007 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC13.1□□□□□ -0.31
SLC25A1P53007 ABR-205ENST00000544583 5595 ntTSL 2 BASIC13.1□□□□□ -0.31
SLC25A1P53007 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SLC25A1P53007 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SLC25A1P53007 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SLC25A1P53007 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC13.1□□□□□ -0.31
SLC25A1P53007 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SLC25A1P53007 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
SLC25A1P53007 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SLC25A1P53007 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC13.1□□□□□ -0.31
SLC25A1P53007 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
SLC25A1P53007 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
SLC25A1P53007 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
SLC25A1P53007 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SLC25A1P53007 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SLC25A1P53007 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SLC25A1P53007 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
SLC25A1P53007 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
SLC25A1P53007 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
SLC25A1P53007 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
SLC25A1P53007 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC13.09□□□□□ -0.31
SLC25A1P53007 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC13.09□□□□□ -0.31
SLC25A1P53007 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
SLC25A1P53007 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC13.09□□□□□ -0.31
SLC25A1P53007 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC13.09□□□□□ -0.31
SLC25A1P53007 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SLC25A1P53007 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC13.09□□□□□ -0.31
SLC25A1P53007 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
SLC25A1P53007 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SLC25A1P53007 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SLC25A1P53007 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
SLC25A1P53007 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
SLC25A1P53007 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC13.09□□□□□ -0.31
SLC25A1P53007 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SLC25A1P53007 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SLC25A1P53007 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SLC25A1P53007 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SLC25A1P53007 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SLC25A1P53007 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SLC25A1P53007 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
SLC25A1P53007 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC13.09□□□□□ -0.31
SLC25A1P53007 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
SLC25A1P53007 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
SLC25A1P53007 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
SLC25A1P53007 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
SLC25A1P53007 MIR770-201ENST00000390219 98 ntBASIC13.09□□□□□ -0.31
SLC25A1P53007 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC13.09□□□□□ -0.31
SLC25A1P53007 RN7SKP175-201ENST00000408472 289 ntBASIC13.09□□□□□ -0.31
SLC25A1P53007 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC13.09□□□□□ -0.31
SLC25A1P53007 ACTG1P3-201ENST00000431775 1114 ntBASIC13.09□□□□□ -0.31
SLC25A1P53007 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC13.09□□□□□ -0.31
SLC25A1P53007 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC13.09□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms