Protein–RNA interactions for Protein: P20248

CCNA2, Cyclin-A2, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA2P20248 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CCNA2P20248 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC14.03□□□□□ -0.16
CCNA2P20248 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
CCNA2P20248 DISP3-201ENST00000294484 5215 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CCNA2P20248 GOLGA8VP-201ENST00000559009 1798 ntBASIC14.03□□□□□ -0.16
CCNA2P20248 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC14.03□□□□□ -0.16
CCNA2P20248 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC14.03□□□□□ -0.16
CCNA2P20248 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC14.03□□□□□ -0.16
CCNA2P20248 RPS6KA1-213ENST00000526792 2596 ntTSL 5 BASIC14.03□□□□□ -0.16
CCNA2P20248 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CCNA2P20248 FAAP100-202ENST00000425898 2996 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CCNA2P20248 RNF216-202ENST00000389902 3293 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
CCNA2P20248 NOL9-201ENST00000377705 6649 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CCNA2P20248 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CCNA2P20248 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CCNA2P20248 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
CCNA2P20248 APOB-202ENST00000399256 3128 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
CCNA2P20248 PRRT2-201ENST00000300797 3002 ntTSL 2 BASIC14.02□□□□□ -0.16
CCNA2P20248 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC14.02□□□□□ -0.16
CCNA2P20248 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
CCNA2P20248 AC019294.4-201ENST00000561777 2905 ntBASIC14.02□□□□□ -0.16
CCNA2P20248 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CCNA2P20248 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC14.02□□□□□ -0.16
CCNA2P20248 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC14.02□□□□□ -0.16
CCNA2P20248 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
CCNA2P20248 AC018442.1-201ENST00000421439 2061 ntBASIC14.02□□□□□ -0.16
CCNA2P20248 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC14.02□□□□□ -0.16
CCNA2P20248 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
CCNA2P20248 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.16
CCNA2P20248 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
CCNA2P20248 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
CCNA2P20248 IFRD1-205ENST00000429071 1938 ntTSL 2 BASIC14.02□□□□□ -0.16
CCNA2P20248 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CCNA2P20248 IFNA6-202ENST00000380210 1544 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
CCNA2P20248 PDE2A-206ENST00000444035 4193 ntAPPRIS ALT1 TSL 5 BASIC14.02□□□□□ -0.17
CCNA2P20248 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CCNA2P20248 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CCNA2P20248 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CCNA2P20248 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CCNA2P20248 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
CCNA2P20248 FAM86LP-201ENST00000478302 853 ntBASIC14.02□□□□□ -0.17
CCNA2P20248 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CCNA2P20248 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CCNA2P20248 AC036164.1-201ENST00000570544 333 ntBASIC14.02□□□□□ -0.17
CCNA2P20248 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC14.02□□□□□ -0.17
CCNA2P20248 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.17
CCNA2P20248 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
CCNA2P20248 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CCNA2P20248 AJ011932.1-201ENST00000621707 465 ntBASIC14.02□□□□□ -0.17
CCNA2P20248 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
CCNA2P20248 ARMCX2-201ENST00000328766 2762 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CCNA2P20248 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
CCNA2P20248 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CCNA2P20248 NTRK3-AS1-201ENST00000569588 2663 ntTSL 2 BASIC14.02□□□□□ -0.17
CCNA2P20248 CTIF-202ENST00000382998 4407 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CCNA2P20248 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC14.02□□□□□ -0.17
CCNA2P20248 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CCNA2P20248 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC14.02□□□□□ -0.17
CCNA2P20248 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CCNA2P20248 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
CCNA2P20248 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CCNA2P20248 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CCNA2P20248 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC14.02□□□□□ -0.17
CCNA2P20248 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
CCNA2P20248 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CCNA2P20248 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CCNA2P20248 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CCNA2P20248 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CCNA2P20248 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
CCNA2P20248 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
CCNA2P20248 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CCNA2P20248 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CCNA2P20248 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
CCNA2P20248 AC007541.1-201ENST00000570282 1469 ntBASIC14.01□□□□□ -0.17
CCNA2P20248 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
CCNA2P20248 SSTR3-201ENST00000610913 4100 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CCNA2P20248 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC14.01□□□□□ -0.17
CCNA2P20248 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC14.01□□□□□ -0.17
CCNA2P20248 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC14.01□□□□□ -0.17
CCNA2P20248 FAM200B-201ENST00000422728 2962 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CCNA2P20248 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC14.01□□□□□ -0.17
CCNA2P20248 BCRP1-201ENST00000444246 691 ntBASIC14.01□□□□□ -0.17
CCNA2P20248 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC14.01□□□□□ -0.17
CCNA2P20248 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC14.01□□□□□ -0.17
CCNA2P20248 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CCNA2P20248 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC14.01□□□□□ -0.17
CCNA2P20248 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC14.01□□□□□ -0.17
CCNA2P20248 RARRES2P5-201ENST00000564013 466 ntBASIC14.01□□□□□ -0.17
CCNA2P20248 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC14.01□□□□□ -0.17
CCNA2P20248 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
CCNA2P20248 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC14.01□□□□□ -0.17
CCNA2P20248 AC009118.2-201ENST00000613275 655 ntBASIC14.01□□□□□ -0.17
CCNA2P20248 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
CCNA2P20248 PPP2R1A-201ENST00000322088 5380 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CCNA2P20248 KARS-201ENST00000302445 2005 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CCNA2P20248 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC14.01□□□□□ -0.17
CCNA2P20248 ITGB8-201ENST00000222573 8751 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CCNA2P20248 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CCNA2P20248 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
CCNA2P20248 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 69.3 ms