Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CD48P09326 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
CD48P09326 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC15.27■□□□□ 0.04
CD48P09326 KRT17P7-201ENST00000451704 1104 ntBASIC15.27■□□□□ 0.04
CD48P09326 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC15.27■□□□□ 0.04
CD48P09326 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC15.27■□□□□ 0.04
CD48P09326 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CD48P09326 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC15.27■□□□□ 0.04
CD48P09326 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC15.27■□□□□ 0.04
CD48P09326 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CD48P09326 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC15.27■□□□□ 0.04
CD48P09326 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CD48P09326 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC15.27■□□□□ 0.04
CD48P09326 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC15.27■□□□□ 0.04
CD48P09326 RN7SL713P-201ENST00000582127 302 ntBASIC15.27■□□□□ 0.04
CD48P09326 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC15.27■□□□□ 0.04
CD48P09326 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CD48P09326 AL358472.3-201ENST00000608147 415 ntBASIC15.27■□□□□ 0.04
CD48P09326 AC012645.4-201ENST00000610691 1061 ntBASIC15.27■□□□□ 0.04
CD48P09326 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC15.27■□□□□ 0.04
CD48P09326 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CD48P09326 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CD48P09326 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC15.27■□□□□ 0.03
CD48P09326 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
CD48P09326 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC15.27■□□□□ 0.03
CD48P09326 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC15.27■□□□□ 0.03
CD48P09326 PDIA3P1-201ENST00000471856 1510 ntBASIC15.27■□□□□ 0.03
CD48P09326 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.03
CD48P09326 KRT8P4-201ENST00000509735 1454 ntBASIC15.27■□□□□ 0.03
CD48P09326 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC15.26■□□□□ 0.03
CD48P09326 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC15.26■□□□□ 0.03
CD48P09326 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC15.26■□□□□ 0.03
CD48P09326 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CD48P09326 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CD48P09326 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CD48P09326 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CD48P09326 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC15.26■□□□□ 0.03
CD48P09326 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC15.26■□□□□ 0.03
CD48P09326 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
CD48P09326 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC15.26■□□□□ 0.03
CD48P09326 KRT8P28-201ENST00000433288 1390 ntBASIC15.26■□□□□ 0.03
CD48P09326 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CD48P09326 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
CD48P09326 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CD48P09326 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CD48P09326 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC15.26■□□□□ 0.03
CD48P09326 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CD48P09326 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
CD48P09326 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC15.26■□□□□ 0.03
CD48P09326 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC15.26■□□□□ 0.03
CD48P09326 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC15.26■□□□□ 0.03
CD48P09326 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CD48P09326 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
CD48P09326 LBX2-201ENST00000341396 886 ntTSL 3 BASIC15.26■□□□□ 0.03
CD48P09326 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
CD48P09326 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CD48P09326 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CD48P09326 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC15.26■□□□□ 0.03
CD48P09326 ARSEP1-201ENST00000420443 635 ntBASIC15.26■□□□□ 0.03
CD48P09326 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
CD48P09326 RGS5-214ENST00000429865 754 ntTSL 3 BASIC15.26■□□□□ 0.03
CD48P09326 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CD48P09326 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
CD48P09326 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC15.26■□□□□ 0.03
CD48P09326 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC15.26■□□□□ 0.03
CD48P09326 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC15.26■□□□□ 0.03
CD48P09326 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC15.26■□□□□ 0.03
CD48P09326 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC15.26■□□□□ 0.03
CD48P09326 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC15.26■□□□□ 0.03
CD48P09326 ORC6-206ENST00000568364 888 ntTSL 5 BASIC15.26■□□□□ 0.03
CD48P09326 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC15.26■□□□□ 0.03
CD48P09326 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CD48P09326 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CD48P09326 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CD48P09326 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC15.26■□□□□ 0.03
CD48P09326 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CD48P09326 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CD48P09326 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CD48P09326 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
CD48P09326 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC15.26■□□□□ 0.03
CD48P09326 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CD48P09326 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CD48P09326 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CD48P09326 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CD48P09326 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
CD48P09326 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CD48P09326 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CD48P09326 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CD48P09326 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CD48P09326 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CD48P09326 AC126755.1-201ENST00000525846 6405 ntBASIC15.25■□□□□ 0.03
CD48P09326 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
CD48P09326 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC15.25■□□□□ 0.03
CD48P09326 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CD48P09326 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
CD48P09326 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
CD48P09326 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
CD48P09326 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
CD48P09326 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC15.25■□□□□ 0.03
CD48P09326 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms