Protein–RNA interactions for Protein: Q99616

CCL13, C-C motif chemokine 13, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL13Q99616 AL136309.1-201ENST00000403917 691 ntBASIC12.4□□□□□ -0.42
CCL13Q99616 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC12.4□□□□□ -0.42
CCL13Q99616 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC12.4□□□□□ -0.42
CCL13Q99616 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC12.4□□□□□ -0.42
CCL13Q99616 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC12.4□□□□□ -0.42
CCL13Q99616 AL355994.2-201ENST00000447882 704 ntBASIC12.4□□□□□ -0.42
CCL13Q99616 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
CCL13Q99616 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC12.4□□□□□ -0.42
CCL13Q99616 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC12.4□□□□□ -0.42
CCL13Q99616 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC12.4□□□□□ -0.42
CCL13Q99616 VPS18-202ENST00000558474 873 ntTSL 3 BASIC12.4□□□□□ -0.42
CCL13Q99616 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC12.4□□□□□ -0.42
CCL13Q99616 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC12.4□□□□□ -0.42
CCL13Q99616 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC12.4□□□□□ -0.42
CCL13Q99616 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC12.4□□□□□ -0.42
CCL13Q99616 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC12.4□□□□□ -0.42
CCL13Q99616 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
CCL13Q99616 AC139749.1-202ENST00000617529 3139 ntBASIC12.4□□□□□ -0.42
CCL13Q99616 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
CCL13Q99616 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
CCL13Q99616 AC140479.7-201ENST00000636301 2332 ntBASIC12.4□□□□□ -0.42
CCL13Q99616 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
CCL13Q99616 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
CCL13Q99616 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
CCL13Q99616 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC12.4□□□□□ -0.42
CCL13Q99616 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
CCL13Q99616 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
CCL13Q99616 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CCL13Q99616 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CCL13Q99616 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
CCL13Q99616 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CCL13Q99616 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
CCL13Q99616 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.43
CCL13Q99616 AL354702.1-201ENST00000442006 1960 ntBASIC12.39□□□□□ -0.43
CCL13Q99616 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC12.39□□□□□ -0.43
CCL13Q99616 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
CCL13Q99616 AC232323.1-201ENST00000540724 2099 ntBASIC12.39□□□□□ -0.43
CCL13Q99616 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CCL13Q99616 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CCL13Q99616 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
CCL13Q99616 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CCL13Q99616 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
CCL13Q99616 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC12.39□□□□□ -0.43
CCL13Q99616 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC12.39□□□□□ -0.43
CCL13Q99616 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
CCL13Q99616 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CCL13Q99616 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
CCL13Q99616 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC12.39□□□□□ -0.43
CCL13Q99616 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
CCL13Q99616 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
CCL13Q99616 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CCL13Q99616 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC12.39□□□□□ -0.43
CCL13Q99616 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CCL13Q99616 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
CCL13Q99616 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CCL13Q99616 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC12.39□□□□□ -0.43
CCL13Q99616 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC12.39□□□□□ -0.43
CCL13Q99616 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
CCL13Q99616 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
CCL13Q99616 OLR1-203ENST00000432556 950 ntTSL 2 BASIC12.39□□□□□ -0.43
CCL13Q99616 HIST2H2BB-201ENST00000449108 381 ntBASIC12.39□□□□□ -0.43
CCL13Q99616 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC12.39□□□□□ -0.43
CCL13Q99616 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC12.39□□□□□ -0.43
CCL13Q99616 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC12.39□□□□□ -0.43
CCL13Q99616 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
CCL13Q99616 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CCL13Q99616 Six3os1_5.1-201ENST00000611000 271 ntBASIC12.39□□□□□ -0.43
CCL13Q99616 AL136301.1-201ENST00000615830 422 ntBASIC12.39□□□□□ -0.43
CCL13Q99616 AC009542.2-202ENST00000619004 1067 ntBASIC12.39□□□□□ -0.43
CCL13Q99616 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
CCL13Q99616 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC12.39□□□□□ -0.43
CCL13Q99616 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC12.39□□□□□ -0.43
CCL13Q99616 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
CCL13Q99616 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC12.39□□□□□ -0.43
CCL13Q99616 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC12.39□□□□□ -0.43
CCL13Q99616 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC12.39□□□□□ -0.43
CCL13Q99616 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
CCL13Q99616 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC12.39□□□□□ -0.43
CCL13Q99616 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CCL13Q99616 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CCL13Q99616 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CCL13Q99616 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
CCL13Q99616 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CCL13Q99616 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC12.39□□□□□ -0.43
CCL13Q99616 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
CCL13Q99616 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
CCL13Q99616 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
CCL13Q99616 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
CCL13Q99616 AC113367.3-201ENST00000508316 1912 ntBASIC12.39□□□□□ -0.43
CCL13Q99616 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC12.39□□□□□ -0.43
CCL13Q99616 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC12.39□□□□□ -0.43
CCL13Q99616 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC12.39□□□□□ -0.43
CCL13Q99616 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
CCL13Q99616 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CCL13Q99616 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC12.38□□□□□ -0.43
CCL13Q99616 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC12.38□□□□□ -0.43
CCL13Q99616 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CCL13Q99616 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC12.38□□□□□ -0.43
CCL13Q99616 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CCL13Q99616 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms