Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
SNX18Q96RF0 AL603764.1-201ENST00000636452 321 ntBASIC13.55□□□□□ -0.24
SNX18Q96RF0 APOB-202ENST00000399256 3128 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
SNX18Q96RF0 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
SNX18Q96RF0 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC13.55□□□□□ -0.24
SNX18Q96RF0 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
SNX18Q96RF0 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SNX18Q96RF0 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC13.55□□□□□ -0.24
SNX18Q96RF0 USP35-204ENST00000530267 2419 ntTSL 2 BASIC13.55□□□□□ -0.24
SNX18Q96RF0 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SNX18Q96RF0 LINC00324-201ENST00000315707 2082 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
SNX18Q96RF0 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
SNX18Q96RF0 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SNX18Q96RF0 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC13.55□□□□□ -0.24
SNX18Q96RF0 OTP-201ENST00000306422 3669 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SNX18Q96RF0 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
SNX18Q96RF0 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SNX18Q96RF0 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SNX18Q96RF0 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC13.55□□□□□ -0.24
SNX18Q96RF0 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
SNX18Q96RF0 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC13.55□□□□□ -0.24
SNX18Q96RF0 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC13.55□□□□□ -0.24
SNX18Q96RF0 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
SNX18Q96RF0 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
SNX18Q96RF0 GLB1L3-201ENST00000389887 3566 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
SNX18Q96RF0 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
SNX18Q96RF0 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
SNX18Q96RF0 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
SNX18Q96RF0 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SNX18Q96RF0 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SNX18Q96RF0 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
SNX18Q96RF0 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SNX18Q96RF0 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SNX18Q96RF0 SEC14L3-204ENST00000403066 2474 ntTSL 2 BASIC13.54□□□□□ -0.24
SNX18Q96RF0 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC13.54□□□□□ -0.24
SNX18Q96RF0 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC13.54□□□□□ -0.24
SNX18Q96RF0 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC13.54□□□□□ -0.24
SNX18Q96RF0 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SNX18Q96RF0 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
SNX18Q96RF0 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC13.54□□□□□ -0.24
SNX18Q96RF0 AL158070.2-201ENST00000623713 1621 ntBASIC13.54□□□□□ -0.24
SNX18Q96RF0 CATSPERE-201ENST00000366531 3038 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
SNX18Q96RF0 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
SNX18Q96RF0 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SNX18Q96RF0 PES1-204ENST00000402284 2144 ntTSL 5 BASIC13.54□□□□□ -0.24
SNX18Q96RF0 DPP8-202ENST00000321147 3125 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
SNX18Q96RF0 ACTR2-202ENST00000377982 2685 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
SNX18Q96RF0 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC13.54□□□□□ -0.24
SNX18Q96RF0 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC13.54□□□□□ -0.24
SNX18Q96RF0 BEND7-201ENST00000341083 2239 ntAPPRIS P3 TSL 2 BASIC13.54□□□□□ -0.24
SNX18Q96RF0 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
SNX18Q96RF0 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC13.54□□□□□ -0.24
SNX18Q96RF0 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SNX18Q96RF0 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SNX18Q96RF0 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC13.54□□□□□ -0.24
SNX18Q96RF0 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC13.54□□□□□ -0.24
SNX18Q96RF0 GK-202ENST00000378941 458 ntTSL 3 BASIC13.54□□□□□ -0.24
SNX18Q96RF0 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
SNX18Q96RF0 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SNX18Q96RF0 B9D1-203ENST00000395615 805 ntTSL 3 BASIC13.54□□□□□ -0.24
SNX18Q96RF0 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SNX18Q96RF0 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC13.54□□□□□ -0.24
SNX18Q96RF0 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC13.54□□□□□ -0.24
SNX18Q96RF0 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC13.54□□□□□ -0.24
SNX18Q96RF0 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC13.54□□□□□ -0.24
SNX18Q96RF0 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC13.54□□□□□ -0.24
SNX18Q96RF0 AL596325.1-201ENST00000563991 1082 ntBASIC13.54□□□□□ -0.24
SNX18Q96RF0 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC13.54□□□□□ -0.24
SNX18Q96RF0 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC13.54□□□□□ -0.24
SNX18Q96RF0 BRI3BPP1-201ENST00000594224 787 ntBASIC13.54□□□□□ -0.24
SNX18Q96RF0 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC13.54□□□□□ -0.24
SNX18Q96RF0 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
SNX18Q96RF0 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC13.54□□□□□ -0.24
SNX18Q96RF0 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SNX18Q96RF0 TNPO2-218ENST00000592287 2914 ntAPPRIS P4 TSL 1 (best) BASIC13.54□□□□□ -0.24
SNX18Q96RF0 SPPL2B-209ENST00000613503 3456 ntAPPRIS P4 TSL 1 (best) BASIC13.54□□□□□ -0.24
SNX18Q96RF0 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC13.54□□□□□ -0.24
SNX18Q96RF0 BEND3P3-201ENST00000611030 2440 ntBASIC13.54□□□□□ -0.24
SNX18Q96RF0 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
SNX18Q96RF0 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SNX18Q96RF0 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC13.54□□□□□ -0.24
SNX18Q96RF0 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SNX18Q96RF0 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
SNX18Q96RF0 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SNX18Q96RF0 FRMD8-201ENST00000317568 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SNX18Q96RF0 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SNX18Q96RF0 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC13.54□□□□□ -0.24
SNX18Q96RF0 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
SNX18Q96RF0 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
SNX18Q96RF0 APCDD1L-AS1-203ENST00000427140 2092 ntTSL 2 BASIC13.54□□□□□ -0.24
SNX18Q96RF0 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SNX18Q96RF0 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
SNX18Q96RF0 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC13.54□□□□□ -0.24
SNX18Q96RF0 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC13.54□□□□□ -0.24
SNX18Q96RF0 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
SNX18Q96RF0 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
SNX18Q96RF0 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC13.53□□□□□ -0.24
SNX18Q96RF0 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
SNX18Q96RF0 IL21R-204ENST00000564089 3009 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
SNX18Q96RF0 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 89.9 ms