Protein–RNA interactions for Protein: Q96BP2

CHCHD1, Coiled-coil-helix-coiled-coil-helix domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 118 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD1Q96BP2 SCAF4-201ENST00000286835 4193 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
CHCHD1Q96BP2 COL3A1-201ENST00000304636 5543 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
CHCHD1Q96BP2 NUP54-201ENST00000264883 2367 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
CHCHD1Q96BP2 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
CHCHD1Q96BP2 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC10.76□□□□□ -0.69
CHCHD1Q96BP2 ADAMTSL2-203ENST00000393061 4270 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
CHCHD1Q96BP2 AC015819.3-201ENST00000624305 2674 ntBASIC10.76□□□□□ -0.69
CHCHD1Q96BP2 AMER3-202ENST00000423981 6172 ntAPPRIS P1 TSL 4 BASIC10.76□□□□□ -0.69
CHCHD1Q96BP2 RERE-212ENST00000476556 4598 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
CHCHD1Q96BP2 GTF2IRD1P1-202ENST00000457166 2426 ntTSL 2 BASIC10.76□□□□□ -0.69
CHCHD1Q96BP2 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC10.76□□□□□ -0.69
CHCHD1Q96BP2 TECPR1-204ENST00000447648 6564 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
CHCHD1Q96BP2 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC10.76□□□□□ -0.69
CHCHD1Q96BP2 CCNE2-205ENST00000520509 3330 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
CHCHD1Q96BP2 KLHL13-209ENST00000545703 3322 ntAPPRIS ALT1 TSL 1 (best) BASIC10.76□□□□□ -0.69
CHCHD1Q96BP2 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC10.76□□□□□ -0.69
CHCHD1Q96BP2 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC10.76□□□□□ -0.69
CHCHD1Q96BP2 C10orf105-202ENST00000441508 4836 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
CHCHD1Q96BP2 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC10.75□□□□□ -0.69
CHCHD1Q96BP2 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
CHCHD1Q96BP2 TRGV9-201ENST00000444775 1735 ntAPPRIS P1 BASIC10.75□□□□□ -0.69
CHCHD1Q96BP2 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
CHCHD1Q96BP2 AGAP12P-201ENST00000585227 2359 ntBASIC10.75□□□□□ -0.69
CHCHD1Q96BP2 TGM2-201ENST00000361475 5070 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
CHCHD1Q96BP2 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC10.75□□□□□ -0.69
CHCHD1Q96BP2 TNRC18P1-201ENST00000502875 3650 ntBASIC10.75□□□□□ -0.69
CHCHD1Q96BP2 AL031728.1-201ENST00000449034 2479 ntTSL 3 BASIC10.75□□□□□ -0.69
CHCHD1Q96BP2 AC060814.4-201ENST00000594169 2163 ntBASIC10.75□□□□□ -0.69
CHCHD1Q96BP2 CACNA1C-231ENST00000616390 2833 ntTSL 2 BASIC10.75□□□□□ -0.69
CHCHD1Q96BP2 TMEM131L-203ENST00000409959 5017 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
CHCHD1Q96BP2 ADGRL1-201ENST00000340736 7853 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
CHCHD1Q96BP2 DCAF6-201ENST00000312263 3186 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
CHCHD1Q96BP2 ITGB2-205ENST00000397850 3178 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
CHCHD1Q96BP2 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
CHCHD1Q96BP2 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
CHCHD1Q96BP2 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC10.75□□□□□ -0.69
CHCHD1Q96BP2 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC10.75□□□□□ -0.69
CHCHD1Q96BP2 FALEC-201ENST00000416894 566 ntTSL 3 BASIC10.75□□□□□ -0.69
CHCHD1Q96BP2 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC10.75□□□□□ -0.69
CHCHD1Q96BP2 PRSS29P-201ENST00000440800 595 ntBASIC10.75□□□□□ -0.69
CHCHD1Q96BP2 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC10.75□□□□□ -0.69
CHCHD1Q96BP2 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC10.75□□□□□ -0.69
CHCHD1Q96BP2 PNMT-203ENST00000581428 677 ntTSL 2 BASIC10.75□□□□□ -0.69
CHCHD1Q96BP2 AC092364.2-202ENST00000597012 1073 ntBASIC10.75□□□□□ -0.69
CHCHD1Q96BP2 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC10.75□□□□□ -0.69
CHCHD1Q96BP2 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC10.75□□□□□ -0.69
CHCHD1Q96BP2 BAIAP2-202ENST00000321300 2879 ntAPPRIS P4 TSL 1 (best) BASIC10.75□□□□□ -0.69
CHCHD1Q96BP2 BCL2L1-201ENST00000307677 2610 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
CHCHD1Q96BP2 MED6-201ENST00000256379 1995 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
CHCHD1Q96BP2 RIN3-212ENST00000620541 3617 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
CHCHD1Q96BP2 DPY19L2P2-205ENST00000439473 3994 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
CHCHD1Q96BP2 NRXN1-210ENST00000406316 9375 ntAPPRIS P3 TSL 5 BASIC10.75□□□□□ -0.69
CHCHD1Q96BP2 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
CHCHD1Q96BP2 ADCY4-202ENST00000418030 3353 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
CHCHD1Q96BP2 VDR-201ENST00000229022 4773 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
CHCHD1Q96BP2 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC10.75□□□□□ -0.69
CHCHD1Q96BP2 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC10.75□□□□□ -0.69
CHCHD1Q96BP2 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
CHCHD1Q96BP2 KIAA0513-201ENST00000258180 7404 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
CHCHD1Q96BP2 PDE4A-204ENST00000440014 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
CHCHD1Q96BP2 STK3-218ENST00000617590 2485 ntTSL 5 BASIC10.75□□□□□ -0.69
CHCHD1Q96BP2 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC10.75□□□□□ -0.69
CHCHD1Q96BP2 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC10.75□□□□□ -0.69
CHCHD1Q96BP2 PTCHD3-201ENST00000438700 2529 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
CHCHD1Q96BP2 PRAME-202ENST00000398743 2196 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
CHCHD1Q96BP2 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
CHCHD1Q96BP2 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
CHCHD1Q96BP2 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC10.74□□□□□ -0.69
CHCHD1Q96BP2 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC10.74□□□□□ -0.69
CHCHD1Q96BP2 SH3PXD2B-201ENST00000311601 7777 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
CHCHD1Q96BP2 CARS-214ENST00000529772 2637 ntTSL 2 BASIC10.74□□□□□ -0.69
CHCHD1Q96BP2 POLD1-210ENST00000599857 3435 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
CHCHD1Q96BP2 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
CHCHD1Q96BP2 SLC35A4-203ENST00000612662 2657 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
CHCHD1Q96BP2 AP000347.1-201ENST00000417194 5004 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
CHCHD1Q96BP2 ADCY7-202ENST00000394697 6213 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
CHCHD1Q96BP2 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
CHCHD1Q96BP2 SLC4A2-201ENST00000392826 3947 ntAPPRIS ALT2 TSL 2 BASIC10.74□□□□□ -0.69
CHCHD1Q96BP2 RPGRIP1-202ENST00000400017 3940 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
CHCHD1Q96BP2 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC10.74□□□□□ -0.69
CHCHD1Q96BP2 ZSWIM3-201ENST00000255152 2773 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
CHCHD1Q96BP2 LSM14A-203ENST00000544216 3596 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
CHCHD1Q96BP2 TMEM41A-203ENST00000421852 2827 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
CHCHD1Q96BP2 LINC01301-202ENST00000506428 2444 ntTSL 2 BASIC10.74□□□□□ -0.69
CHCHD1Q96BP2 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC10.74□□□□□ -0.69
CHCHD1Q96BP2 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
CHCHD1Q96BP2 GRN-214ENST00000589265 1632 ntTSL 5 BASIC10.74□□□□□ -0.69
CHCHD1Q96BP2 NBEA-204ENST00000400445 11119 ntAPPRIS P2 TSL 5 BASIC10.74□□□□□ -0.69
CHCHD1Q96BP2 L3MBTL1-204ENST00000418998 3365 ntAPPRIS ALT2 TSL 2 BASIC10.74□□□□□ -0.69
CHCHD1Q96BP2 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
CHCHD1Q96BP2 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC10.74□□□□□ -0.69
CHCHD1Q96BP2 PP14571-201ENST00000404327 934 ntTSL 2 BASIC10.74□□□□□ -0.69
CHCHD1Q96BP2 CTCFL-208ENST00000432255 2955 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
CHCHD1Q96BP2 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC10.74□□□□□ -0.69
CHCHD1Q96BP2 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC10.74□□□□□ -0.69
CHCHD1Q96BP2 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC10.74□□□□□ -0.69
CHCHD1Q96BP2 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
CHCHD1Q96BP2 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
CHCHD1Q96BP2 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC10.74□□□□□ -0.69
CHCHD1Q96BP2 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC10.74□□□□□ -0.69
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms