Protein–RNA interactions for Protein: Q86VP3

PACS2, Phosphofurin acidic cluster sorting protein 2, humanhuman

Predictions only

Length 889 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACS2Q86VP3 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC15.03■□□□□ -0
PACS2Q86VP3 GRAMD1B-216ENST00000638157 3849 ntTSL 5 BASIC15.03■□□□□ -0
PACS2Q86VP3 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
PACS2Q86VP3 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
PACS2Q86VP3 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
PACS2Q86VP3 NIN-202ENST00000324330 4364 ntTSL 5 BASIC15.03■□□□□ -0
PACS2Q86VP3 SF1-209ENST00000433274 2317 ntTSL 2 BASIC15.03■□□□□ -0
PACS2Q86VP3 SUPT7L-203ENST00000405491 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
PACS2Q86VP3 ZMYND10-201ENST00000231749 2896 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
PACS2Q86VP3 CSF2RB-203ENST00000406230 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
PACS2Q86VP3 NTSR1-201ENST00000370501 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
PACS2Q86VP3 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
PACS2Q86VP3 GPR107-208ENST00000610997 2813 ntTSL 5 BASIC15.02■□□□□ -0
PACS2Q86VP3 CCDC142-202ENST00000393965 3406 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
PACS2Q86VP3 AC092143.1-201ENST00000556922 2776 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
PACS2Q86VP3 NR1H3-217ENST00000467728 2731 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
PACS2Q86VP3 NGLY1-205ENST00000417874 2062 ntTSL 2 BASIC15.02■□□□□ -0
PACS2Q86VP3 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
PACS2Q86VP3 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
PACS2Q86VP3 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC15.02■□□□□ -0
PACS2Q86VP3 PIP5K1A-204ENST00000409426 3737 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
PACS2Q86VP3 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
PACS2Q86VP3 TPO-202ENST00000345913 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
PACS2Q86VP3 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC15.02■□□□□ -0
PACS2Q86VP3 IKBKE-201ENST00000578328 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
PACS2Q86VP3 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC15.02■□□□□ -0
PACS2Q86VP3 FRMD1-205ENST00000440994 2857 ntAPPRIS ALT2 TSL 2 BASIC15.02■□□□□ -0
PACS2Q86VP3 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC15.02■□□□□ -0
PACS2Q86VP3 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC15.02■□□□□ -0
PACS2Q86VP3 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
PACS2Q86VP3 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC15.02■□□□□ -0
PACS2Q86VP3 PNMT-202ENST00000394246 821 ntTSL 2 BASIC15.02■□□□□ -0
PACS2Q86VP3 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC15.02■□□□□ -0
PACS2Q86VP3 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC15.02■□□□□ -0
PACS2Q86VP3 AC013470.3-201ENST00000420252 1194 ntBASIC15.02■□□□□ -0
PACS2Q86VP3 FAM58DP-201ENST00000428076 619 ntBASIC15.02■□□□□ -0
PACS2Q86VP3 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC15.02■□□□□ -0
PACS2Q86VP3 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC15.02■□□□□ -0
PACS2Q86VP3 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
PACS2Q86VP3 AC069234.2-201ENST00000541383 575 ntTSL 3 BASIC15.02■□□□□ -0
PACS2Q86VP3 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
PACS2Q86VP3 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC15.02■□□□□ -0
PACS2Q86VP3 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC15.02■□□□□ -0
PACS2Q86VP3 LSM12-202ENST00000585388 942 ntTSL 3 BASIC15.02■□□□□ -0
PACS2Q86VP3 SSH2-211ENST00000590153 570 ntTSL 4 BASIC15.02■□□□□ -0
PACS2Q86VP3 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC15.02■□□□□ -0
PACS2Q86VP3 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC15.02■□□□□ -0
PACS2Q86VP3 AC006387.1-201ENST00000626365 671 ntTSL 5 BASIC15.02■□□□□ -0
PACS2Q86VP3 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC15.02■□□□□ -0
PACS2Q86VP3 AC107375.1-201ENST00000564464 2231 ntBASIC15.02□□□□□ -0.01
PACS2Q86VP3 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
PACS2Q86VP3 DMBT1P1-203ENST00000636837 4628 ntBASIC15.02□□□□□ -0.01
PACS2Q86VP3 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC15.02□□□□□ -0.01
PACS2Q86VP3 DLX1-201ENST00000341900 2130 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
PACS2Q86VP3 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
PACS2Q86VP3 AP1B1-201ENST00000317368 3903 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
PACS2Q86VP3 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC15.02□□□□□ -0.01
PACS2Q86VP3 TCAF2-205ENST00000444908 2976 ntTSL 5 BASIC15.02□□□□□ -0.01
PACS2Q86VP3 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
PACS2Q86VP3 PDE4A-204ENST00000440014 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
PACS2Q86VP3 COPS7B-223ENST00000611614 2468 ntTSL 3 BASIC15.02□□□□□ -0.01
PACS2Q86VP3 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC15.02□□□□□ -0.01
PACS2Q86VP3 KRT42P-202ENST00000438131 2895 ntTSL 2 BASIC15.02□□□□□ -0.01
PACS2Q86VP3 EFR3B-205ENST00000405108 2432 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
PACS2Q86VP3 FES-201ENST00000328850 2829 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
PACS2Q86VP3 TRPM4-201ENST00000252826 4109 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
PACS2Q86VP3 SLC37A4-202ENST00000357590 2356 ntTSL 5 BASIC15.02□□□□□ -0.01
PACS2Q86VP3 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
PACS2Q86VP3 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PACS2Q86VP3 URGCP-207ENST00000453200 4042 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
PACS2Q86VP3 LRRC32-201ENST00000260061 4207 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PACS2Q86VP3 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
PACS2Q86VP3 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC15.01□□□□□ -0.01
PACS2Q86VP3 KLHL13-209ENST00000545703 3322 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PACS2Q86VP3 CYTH1-203ENST00000585509 3315 ntTSL 5 BASIC15.01□□□□□ -0.01
PACS2Q86VP3 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PACS2Q86VP3 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PACS2Q86VP3 TMEM57-201ENST00000374343 3917 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PACS2Q86VP3 SAP30BP-202ENST00000355423 2439 ntTSL 2 BASIC15.01□□□□□ -0.01
PACS2Q86VP3 TMEM260-201ENST00000261556 4264 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
PACS2Q86VP3 PDZRN3-208ENST00000479530 2778 ntTSL 2 BASIC15.01□□□□□ -0.01
PACS2Q86VP3 KIF12-201ENST00000374118 2001 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
PACS2Q86VP3 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC15.01□□□□□ -0.01
PACS2Q86VP3 TBC1D22B-201ENST00000373491 3462 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
PACS2Q86VP3 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
PACS2Q86VP3 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC15.01□□□□□ -0.01
PACS2Q86VP3 AL139400.1-201ENST00000366220 510 ntBASIC15.01□□□□□ -0.01
PACS2Q86VP3 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
PACS2Q86VP3 SPDYE7P-202ENST00000420373 878 ntBASIC15.01□□□□□ -0.01
PACS2Q86VP3 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC15.01□□□□□ -0.01
PACS2Q86VP3 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC15.01□□□□□ -0.01
PACS2Q86VP3 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC15.01□□□□□ -0.01
PACS2Q86VP3 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC15.01□□□□□ -0.01
PACS2Q86VP3 AC098859.1-201ENST00000502915 1238 ntBASIC15.01□□□□□ -0.01
PACS2Q86VP3 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC15.01□□□□□ -0.01
PACS2Q86VP3 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC15.01□□□□□ -0.01
PACS2Q86VP3 SPTSSB-204ENST00000617024 1292 ntBASIC15.01□□□□□ -0.01
PACS2Q86VP3 AC093028.1-201ENST00000622998 982 ntBASIC15.01□□□□□ -0.01
PACS2Q86VP3 PDE9A-202ENST00000328862 1956 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
PACS2Q86VP3 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms