RNA–Protein interactions for RNA: ENST00000638157.1

GRAMD1B-216, Transcript of GRAM domain containing 1B, humanhuman

TSL 5 BASIC

Gene GRAMD1B, Length 3,849 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1B-216ENST00000638157 NISCHQ9Y2I1 1504 aa25.15■■□□□ 1.62
GRAMD1B-216ENST00000638157 DCAF8L2P0C7V8 631 aa22.95■■□□□ 1.26
GRAMD1B-216ENST00000638157 SHROOM4Q9ULL8 1493 aa21.89■■□□□ 1.09
GRAMD1B-216ENST00000638157 PCGF6Q9BYE7 350 aa21.72■■□□□ 1.07
GRAMD1B-216ENST00000638157 PPARGC1BQ86YN6 1023 aaKnown RBP21.71■■□□□ 1.07
GRAMD1B-216ENST00000638157 ABCC9O60706 1549 aa21.63■■□□□ 1.05
GRAMD1B-216ENST00000638157 SUPT5HO00267 1087 aaKnown RBP21.55■■□□□ 1.04
GRAMD1B-216ENST00000638157 HRCP23327 699 aa21.55■■□□□ 1.04
GRAMD1B-216ENST00000638157 PELP1Q8IZL8 1130 aaKnown RBP21.5■■□□□ 1.03
GRAMD1B-216ENST00000638157 CCDC180Q9P1Z9 1646 aa21.35■■□□□ 1.01
GRAMD1B-216ENST00000638157 ZCCHC6Q5VYS8 1495 aaKnown RBP20.91■□□□□ 0.94
GRAMD1B-216ENST00000638157 PABPN1Q86U42 306 aaKnown RBP eCLIP20.86■□□□□ 0.93
GRAMD1B-216ENST00000638157 EHMT2Q96KQ7 1210 aa20.79■□□□□ 0.92
GRAMD1B-216ENST00000638157 MYT1Q01538 1121 aa20.75■□□□□ 0.91
GRAMD1B-216ENST00000638157 SCAF1Q9H7N4 1312 aaKnown RBP20.74■□□□□ 0.91
GRAMD1B-216ENST00000638157 SCRIBQ14160 1630 aa20.52■□□□□ 0.87
GRAMD1B-216ENST00000638157 YTHDC1Q96MU7 727 aaKnown RBP20.47■□□□□ 0.87
GRAMD1B-216ENST00000638157 LOC105371045A0A1W2PR82 267 aa20.47■□□□□ 0.87
GRAMD1B-216ENST00000638157 GTF3C3Q9Y5Q9 886 aa20.42■□□□□ 0.86
GRAMD1B-216ENST00000638157 RB1CC1Q8TDY2 1594 aa20.39■□□□□ 0.85
GRAMD1B-216ENST00000638157 CENPBP07199 599 aaPredicted RBP20.37■□□□□ 0.85
GRAMD1B-216ENST00000638157 NACADO15069 1562 aa20.36■□□□□ 0.85
GRAMD1B-216ENST00000638157 CHIC1Q5VXU3 224 aa20.28■□□□□ 0.84
GRAMD1B-216ENST00000638157 TRIM26Q12899 539 aaPredicted RBP20.27■□□□□ 0.84
GRAMD1B-216ENST00000638157 TTBK1Q5TCY1 1321 aaPredicted RBP20.25■□□□□ 0.83
GRAMD1B-216ENST00000638157 DCAF1Q9Y4B6 1507 aa20.25■□□□□ 0.83
GRAMD1B-216ENST00000638157 FAM9AQ8IZU1 332 aaPredicted RBP20.24■□□□□ 0.83
GRAMD1B-216ENST00000638157 ZEB1P37275 1124 aaPredicted RBP20.24■□□□□ 0.83
GRAMD1B-216ENST00000638157 NEUROD1Q13562 356 aa20.21■□□□□ 0.83
GRAMD1B-216ENST00000638157 ACIN1Q9UKV3 1341 aaKnown RBP20.17■□□□□ 0.82
GRAMD1B-216ENST00000638157 CCER1Q8TC90 406 aaPredicted RBP20.1■□□□□ 0.81
GRAMD1B-216ENST00000638157 MYO15BQ96JP2 1530 aa19.96■□□□□ 0.79
GRAMD1B-216ENST00000638157 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.95■□□□□ 0.78
GRAMD1B-216ENST00000638157 DIEXFQ68CQ4 756 aaKnown RBP19.92■□□□□ 0.78
GRAMD1B-216ENST00000638157 CECR2Q9BXF3 1484 aa19.84■□□□□ 0.77
GRAMD1B-216ENST00000638157 TRIM41Q8WV44 630 aa19.81■□□□□ 0.76
GRAMD1B-216ENST00000638157 RSF1Q96T23 1441 aaPredicted RBP19.72■□□□□ 0.75
GRAMD1B-216ENST00000638157 BCL11AQ9H165 835 aa19.67■□□□□ 0.74
GRAMD1B-216ENST00000638157 MROH2BQ7Z745 1585 aa19.55■□□□□ 0.72
GRAMD1B-216ENST00000638157 BCANQ96GW7 911 aa19.53■□□□□ 0.72
GRAMD1B-216ENST00000638157 BAZ1AQ9NRL2 1556 aaPredicted RBP19.49■□□□□ 0.71
GRAMD1B-216ENST00000638157 ERICH6Q7L0X2 663 aa19.45■□□□□ 0.7
GRAMD1B-216ENST00000638157 RANGAP1P46060 587 aaPredicted RBP19.44■□□□□ 0.7
GRAMD1B-216ENST00000638157 BAZ1BQ9UIG0 1483 aaKnown RBP19.38■□□□□ 0.69
GRAMD1B-216ENST00000638157 BICRAQ9NZM4 1560 aa19.32■□□□□ 0.68
GRAMD1B-216ENST00000638157 WIZO95785 1651 aa19.29■□□□□ 0.68
GRAMD1B-216ENST00000638157 ANP32EQ9BTT0 268 aa19.28■□□□□ 0.68
GRAMD1B-216ENST00000638157 UBTFP17480 764 aaKnown RBP19.27■□□□□ 0.67
GRAMD1B-216ENST00000638157 MIER1Q8N108 512 aa19.25■□□□□ 0.67
GRAMD1B-216ENST00000638157 CSRNP3Q8WYN3 585 aa19.24■□□□□ 0.67
GRAMD1B-216ENST00000638157 SMARCA4P51532 1647 aa19.22■□□□□ 0.67
GRAMD1B-216ENST00000638157 UNC13AQ9UPW8 1703 aa19.21■□□□□ 0.67
GRAMD1B-216ENST00000638157 ATAD2BQ9ULI0 1458 aa19.2■□□□□ 0.66
GRAMD1B-216ENST00000638157 ZNF316A6NFI3 1004 aaPredicted RBP19.2■□□□□ 0.66
GRAMD1B-216ENST00000638157 HNRNPUL2Q1KMD3 747 aaKnown RBP19.15■□□□□ 0.66
GRAMD1B-216ENST00000638157 EIF4G1Q04637 1599 aaKnown RBP19.13■□□□□ 0.65
GRAMD1B-216ENST00000638157 SMARCA2P51531 1590 aa19.13■□□□□ 0.65
GRAMD1B-216ENST00000638157 CCDC88BA6NC98 1476 aa19.11■□□□□ 0.65
GRAMD1B-216ENST00000638157 DNAJC5BQ9UF47 199 aa19.1■□□□□ 0.65
GRAMD1B-216ENST00000638157 NEFLP07196 543 aa19.06■□□□□ 0.64
GRAMD1B-216ENST00000638157 PRKCSHP14314 528 aaPredicted RBP18.99■□□□□ 0.63
GRAMD1B-216ENST00000638157 TOP2AP11388 1531 aaKnown RBP18.99■□□□□ 0.63
GRAMD1B-216ENST00000638157 ATP1B4Q9UN42 357 aaPredicted RBP18.98■□□□□ 0.63
GRAMD1B-216ENST00000638157 ITGAEP38570 1179 aa18.97■□□□□ 0.63
GRAMD1B-216ENST00000638157 SUPT16HQ9Y5B9 1047 aaKnown RBP18.95■□□□□ 0.62
GRAMD1B-216ENST00000638157 TSHZ2Q9NRE2 1034 aa18.93■□□□□ 0.62
GRAMD1B-216ENST00000638157 APLP2Q06481 763 aa18.92■□□□□ 0.62
GRAMD1B-216ENST00000638157 CC2D2AQ9P2K1 1620 aa18.92■□□□□ 0.62
GRAMD1B-216ENST00000638157 NCAPD3P42695 1498 aa18.92■□□□□ 0.62
GRAMD1B-216ENST00000638157 FBLN2P98095 1184 aa18.91■□□□□ 0.62
GRAMD1B-216ENST00000638157 FKBP8Q14318 412 aa18.91■□□□□ 0.62
GRAMD1B-216ENST00000638157 WRNQ14191 1432 aaPredicted RBP eCLIP18.85■□□□□ 0.61
GRAMD1B-216ENST00000638157 CADPSQ9ULU8 1353 aa18.83■□□□□ 0.6
GRAMD1B-216ENST00000638157 ABCC8Q09428 1581 aa18.79■□□□□ 0.6
GRAMD1B-216ENST00000638157 ERCC6Q03468 1493 aa18.79■□□□□ 0.6
GRAMD1B-216ENST00000638157 NBR1Q14596 966 aa18.75■□□□□ 0.59
GRAMD1B-216ENST00000638157 RTN4Q9NQC3 1192 aaKnown RBP18.72■□□□□ 0.59
GRAMD1B-216ENST00000638157 PDS5BQ9NTI5 1447 aa18.68■□□□□ 0.58
GRAMD1B-216ENST00000638157 NESP48681 1621 aa18.67■□□□□ 0.58
GRAMD1B-216ENST00000638157 CCDC136Q96JN2 1154 aa18.67■□□□□ 0.58
GRAMD1B-216ENST00000638157 EIF5BO60841 1220 aaKnown RBP18.66■□□□□ 0.58
GRAMD1B-216ENST00000638157 P3H3Q8IVL6 736 aa18.66■□□□□ 0.58
GRAMD1B-216ENST00000638157 IRX6P78412 446 aaPredicted RBP18.64■□□□□ 0.57
GRAMD1B-216ENST00000638157 RBM19Q9Y4C8 960 aaKnown RBP18.63■□□□□ 0.57
GRAMD1B-216ENST00000638157 HMGXB3Q12766 1538 aa18.62■□□□□ 0.57
GRAMD1B-216ENST00000638157 TRIM52Q96A61 297 aa18.61■□□□□ 0.57
GRAMD1B-216ENST00000638157 SOGA1O94964 1423 aa18.6■□□□□ 0.57
GRAMD1B-216ENST00000638157 FANCD2Q9BXW9 1451 aa18.59■□□□□ 0.57
GRAMD1B-216ENST00000638157 ANO8Q9HCE9 1232 aaPredicted RBP18.58■□□□□ 0.56
GRAMD1B-216ENST00000638157 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.56■□□□□ 0.56
GRAMD1B-216ENST00000638157 RTL5Q5HYW3 569 aaPredicted RBP18.56■□□□□ 0.56
GRAMD1B-216ENST00000638157 CDK11AQ9UQ88 783 aaPredicted RBP18.53■□□□□ 0.56
GRAMD1B-216ENST00000638157 PEG3Q9GZU2 1588 aa18.53■□□□□ 0.56
GRAMD1B-216ENST00000638157 TDRD9Q8NDG6 1382 aaKnown RBP18.52■□□□□ 0.56
GRAMD1B-216ENST00000638157 CNGB1Q14028 1251 aaPredicted RBP18.52■□□□□ 0.56
GRAMD1B-216ENST00000638157 CEP164Q9UPV0 1460 aa18.51■□□□□ 0.55
GRAMD1B-216ENST00000638157 CFTRP13569 1480 aa18.5■□□□□ 0.55
GRAMD1B-216ENST00000638157 DEKP35659 375 aaKnown RBP18.5■□□□□ 0.55
GRAMD1B-216ENST00000638157 CHMP7Q8WUX9 453 aaPredicted RBP18.5■□□□□ 0.55
GRAMD1B-216ENST00000638157 CUX2O14529 1486 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 148.3 ms