Protein–RNA interactions for Protein: P26045

PTPN3, Tyrosine-protein phosphatase non-receptor type 3, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3P26045 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
PTPN3P26045 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC15.06■□□□□ 0
PTPN3P26045 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
PTPN3P26045 AC011498.7-201ENST00000624986 2027 ntBASIC15.05■□□□□ 0
PTPN3P26045 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
PTPN3P26045 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC15.05■□□□□ 0
PTPN3P26045 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
PTPN3P26045 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
PTPN3P26045 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC15.05■□□□□ 0
PTPN3P26045 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
PTPN3P26045 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ 0
PTPN3P26045 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC15.05■□□□□ 0
PTPN3P26045 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC15.05■□□□□ 0
PTPN3P26045 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
PTPN3P26045 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC15.05■□□□□ 0
PTPN3P26045 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
PTPN3P26045 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC15.05■□□□□ -0
PTPN3P26045 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC15.05■□□□□ -0
PTPN3P26045 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
PTPN3P26045 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC15.05■□□□□ -0
PTPN3P26045 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC15.05■□□□□ -0
PTPN3P26045 RGS5-214ENST00000429865 754 ntTSL 3 BASIC15.05■□□□□ -0
PTPN3P26045 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC15.05■□□□□ -0
PTPN3P26045 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC15.05■□□□□ -0
PTPN3P26045 GAPDHP21-201ENST00000450301 1010 ntBASIC15.05■□□□□ -0
PTPN3P26045 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC15.05■□□□□ -0
PTPN3P26045 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC15.05■□□□□ -0
PTPN3P26045 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC15.05■□□□□ -0
PTPN3P26045 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC15.05■□□□□ -0
PTPN3P26045 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
PTPN3P26045 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC15.05■□□□□ -0
PTPN3P26045 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC15.05■□□□□ -0
PTPN3P26045 MVK-217ENST00000639206 367 ntTSL 5 BASIC15.05■□□□□ -0
PTPN3P26045 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
PTPN3P26045 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
PTPN3P26045 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC15.05■□□□□ -0
PTPN3P26045 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC15.05■□□□□ -0
PTPN3P26045 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC15.05■□□□□ -0
PTPN3P26045 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC15.05■□□□□ -0
PTPN3P26045 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC15.05■□□□□ -0
PTPN3P26045 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
PTPN3P26045 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC15.05■□□□□ -0
PTPN3P26045 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ -0
PTPN3P26045 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC15.05■□□□□ -0
PTPN3P26045 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC15.05■□□□□ -0
PTPN3P26045 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
PTPN3P26045 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
PTPN3P26045 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC15.05■□□□□ -0
PTPN3P26045 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
PTPN3P26045 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
PTPN3P26045 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC15.04■□□□□ -0
PTPN3P26045 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PTPN3P26045 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
PTPN3P26045 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
PTPN3P26045 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC15.04■□□□□ -0
PTPN3P26045 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC15.04■□□□□ -0
PTPN3P26045 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC15.04■□□□□ -0
PTPN3P26045 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PTPN3P26045 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC15.04■□□□□ -0
PTPN3P26045 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC15.04■□□□□ -0
PTPN3P26045 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC15.04■□□□□ -0
PTPN3P26045 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC15.04■□□□□ -0
PTPN3P26045 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PTPN3P26045 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC15.04■□□□□ -0
PTPN3P26045 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC15.04■□□□□ -0
PTPN3P26045 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PTPN3P26045 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC15.04■□□□□ -0
PTPN3P26045 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
PTPN3P26045 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PTPN3P26045 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PTPN3P26045 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC15.04■□□□□ -0
PTPN3P26045 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
PTPN3P26045 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
PTPN3P26045 AL136309.1-201ENST00000403917 691 ntBASIC15.04■□□□□ -0
PTPN3P26045 RPL7P3-201ENST00000441388 714 ntBASIC15.04■□□□□ -0
PTPN3P26045 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC15.04■□□□□ -0
PTPN3P26045 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PTPN3P26045 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC15.04■□□□□ -0
PTPN3P26045 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC15.04■□□□□ -0
PTPN3P26045 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
PTPN3P26045 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC15.04■□□□□ -0
PTPN3P26045 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
PTPN3P26045 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC15.04■□□□□ -0
PTPN3P26045 C2orf69P2-201ENST00000562032 1123 ntBASIC15.04■□□□□ -0
PTPN3P26045 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC15.04■□□□□ -0
PTPN3P26045 AL358472.3-201ENST00000608147 415 ntBASIC15.04■□□□□ -0
PTPN3P26045 WNT11-204ENST00000621122 789 ntTSL 5 BASIC15.04■□□□□ -0
PTPN3P26045 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
PTPN3P26045 RHOXF1P1-202ENST00000635473 501 ntBASIC15.04■□□□□ -0
PTPN3P26045 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
PTPN3P26045 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC15.04■□□□□ -0
PTPN3P26045 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
PTPN3P26045 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PTPN3P26045 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC15.04■□□□□ -0
PTPN3P26045 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
PTPN3P26045 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PTPN3P26045 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PTPN3P26045 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PTPN3P26045 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
PTPN3P26045 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC15.04■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 74.4 ms