Protein–RNA interactions for Protein: P18206

VCL, Vinculin, humanhuman

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCLP18206 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
VCLP18206 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
VCLP18206 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
VCLP18206 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
VCLP18206 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
VCLP18206 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
VCLP18206 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
VCLP18206 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
VCLP18206 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
VCLP18206 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
VCLP18206 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
VCLP18206 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
VCLP18206 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
VCLP18206 USP35-204ENST00000530267 2419 ntTSL 2 BASIC14.94□□□□□ -0.02
VCLP18206 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
VCLP18206 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
VCLP18206 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
VCLP18206 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC14.94□□□□□ -0.02
VCLP18206 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC14.94□□□□□ -0.02
VCLP18206 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
VCLP18206 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC14.94□□□□□ -0.02
VCLP18206 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
VCLP18206 PDIA3P1-201ENST00000471856 1510 ntBASIC14.94□□□□□ -0.02
VCLP18206 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC14.94□□□□□ -0.02
VCLP18206 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
VCLP18206 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
VCLP18206 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
VCLP18206 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC14.94□□□□□ -0.02
VCLP18206 PES1-204ENST00000402284 2144 ntTSL 5 BASIC14.94□□□□□ -0.02
VCLP18206 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
VCLP18206 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
VCLP18206 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC14.94□□□□□ -0.02
VCLP18206 CROCCP4-201ENST00000457096 498 ntBASIC14.94□□□□□ -0.02
VCLP18206 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC14.94□□□□□ -0.02
VCLP18206 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
VCLP18206 NOP2-220ENST00000545915 630 ntTSL 2 BASIC14.94□□□□□ -0.02
VCLP18206 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC14.94□□□□□ -0.02
VCLP18206 IFT20-216ENST00000588477 774 ntTSL 5 BASIC14.94□□□□□ -0.02
VCLP18206 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
VCLP18206 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC14.94□□□□□ -0.02
VCLP18206 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC14.94□□□□□ -0.02
VCLP18206 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
VCLP18206 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC14.94□□□□□ -0.02
VCLP18206 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
VCLP18206 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
VCLP18206 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC14.94□□□□□ -0.02
VCLP18206 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
VCLP18206 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
VCLP18206 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC14.94□□□□□ -0.02
VCLP18206 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
VCLP18206 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
VCLP18206 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC14.94□□□□□ -0.02
VCLP18206 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
VCLP18206 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC14.94□□□□□ -0.02
VCLP18206 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
VCLP18206 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
VCLP18206 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC14.94□□□□□ -0.02
VCLP18206 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
VCLP18206 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
VCLP18206 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC14.93□□□□□ -0.02
VCLP18206 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC14.93□□□□□ -0.02
VCLP18206 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
VCLP18206 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
VCLP18206 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
VCLP18206 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
VCLP18206 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
VCLP18206 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC14.93□□□□□ -0.02
VCLP18206 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
VCLP18206 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
VCLP18206 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
VCLP18206 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
VCLP18206 TPM3P8-201ENST00000330554 643 ntBASIC14.93□□□□□ -0.02
VCLP18206 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
VCLP18206 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC14.93□□□□□ -0.02
VCLP18206 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC14.93□□□□□ -0.02
VCLP18206 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
VCLP18206 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC14.93□□□□□ -0.02
VCLP18206 RPL7P3-201ENST00000441388 714 ntBASIC14.93□□□□□ -0.02
VCLP18206 CTBP2P5-201ENST00000454986 1264 ntBASIC14.93□□□□□ -0.02
VCLP18206 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC14.93□□□□□ -0.02
VCLP18206 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC14.93□□□□□ -0.02
VCLP18206 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
VCLP18206 RPL8-205ENST00000527914 551 ntTSL 3 BASIC14.93□□□□□ -0.02
VCLP18206 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC14.93□□□□□ -0.02
VCLP18206 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC14.93□□□□□ -0.02
VCLP18206 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC14.93□□□□□ -0.02
VCLP18206 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
VCLP18206 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC14.93□□□□□ -0.02
VCLP18206 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
VCLP18206 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
VCLP18206 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
VCLP18206 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC14.93□□□□□ -0.02
VCLP18206 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
VCLP18206 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
VCLP18206 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
VCLP18206 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
VCLP18206 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC14.93□□□□□ -0.02
VCLP18206 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC14.93□□□□□ -0.02
VCLP18206 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
VCLP18206 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 68.9 ms