Protein–RNA interactions for Protein: P12645

BMP3, Bone morphogenetic protein 3, humanhuman

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BMP3P12645 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC16.92■□□□□ 0.3
BMP3P12645 AC027237.1-201ENST00000560942 655 ntBASIC16.92■□□□□ 0.3
BMP3P12645 MIR4754-201ENST00000582477 89 ntBASIC16.92■□□□□ 0.3
BMP3P12645 MIR3188-201ENST00000583494 85 ntBASIC16.92■□□□□ 0.3
BMP3P12645 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
BMP3P12645 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC16.92■□□□□ 0.3
BMP3P12645 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC16.92■□□□□ 0.3
BMP3P12645 AC012044.1-201ENST00000603431 297 ntBASIC16.92■□□□□ 0.3
BMP3P12645 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC16.92■□□□□ 0.3
BMP3P12645 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC16.92■□□□□ 0.3
BMP3P12645 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
BMP3P12645 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC16.92■□□□□ 0.3
BMP3P12645 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC16.92■□□□□ 0.3
BMP3P12645 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
BMP3P12645 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
BMP3P12645 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC16.92■□□□□ 0.3
BMP3P12645 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
BMP3P12645 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
BMP3P12645 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC16.92■□□□□ 0.3
BMP3P12645 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
BMP3P12645 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
BMP3P12645 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
BMP3P12645 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
BMP3P12645 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
BMP3P12645 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC16.91■□□□□ 0.3
BMP3P12645 USP35-204ENST00000530267 2419 ntTSL 2 BASIC16.91■□□□□ 0.3
BMP3P12645 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
BMP3P12645 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC16.91■□□□□ 0.3
BMP3P12645 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
BMP3P12645 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
BMP3P12645 MPZL2-202ENST00000438295 1370 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
BMP3P12645 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC16.91■□□□□ 0.3
BMP3P12645 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
BMP3P12645 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC16.91■□□□□ 0.3
BMP3P12645 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
BMP3P12645 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
BMP3P12645 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC16.91■□□□□ 0.3
BMP3P12645 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
BMP3P12645 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
BMP3P12645 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC16.91■□□□□ 0.3
BMP3P12645 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
BMP3P12645 AC092506.1-202ENST00000401022 528 ntBASIC16.91■□□□□ 0.3
BMP3P12645 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC16.91■□□□□ 0.3
BMP3P12645 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC16.91■□□□□ 0.3
BMP3P12645 TSPY25P-201ENST00000429463 745 ntBASIC16.91■□□□□ 0.3
BMP3P12645 ST13P19-201ENST00000442505 1124 ntBASIC16.91■□□□□ 0.3
BMP3P12645 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC16.91■□□□□ 0.3
BMP3P12645 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
BMP3P12645 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC16.91■□□□□ 0.3
BMP3P12645 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC16.91■□□□□ 0.3
BMP3P12645 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC16.91■□□□□ 0.3
BMP3P12645 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
BMP3P12645 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC16.91■□□□□ 0.3
BMP3P12645 CDK7-214ENST00000626796 358 ntTSL 5 BASIC16.91■□□□□ 0.3
BMP3P12645 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC16.91■□□□□ 0.3
BMP3P12645 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
BMP3P12645 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
BMP3P12645 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC16.91■□□□□ 0.3
BMP3P12645 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
BMP3P12645 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
BMP3P12645 LINC01165-201ENST00000445190 1623 ntBASIC16.91■□□□□ 0.3
BMP3P12645 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
BMP3P12645 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
BMP3P12645 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
BMP3P12645 FRMPD2B-201ENST00000431305 1347 ntBASIC16.91■□□□□ 0.3
BMP3P12645 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
BMP3P12645 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC16.91■□□□□ 0.3
BMP3P12645 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
BMP3P12645 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
BMP3P12645 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
BMP3P12645 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
BMP3P12645 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
BMP3P12645 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
BMP3P12645 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
BMP3P12645 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC16.9■□□□□ 0.3
BMP3P12645 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
BMP3P12645 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC16.9■□□□□ 0.3
BMP3P12645 FGD5P1-202ENST00000614866 2498 ntBASIC16.9■□□□□ 0.3
BMP3P12645 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC16.9■□□□□ 0.3
BMP3P12645 NELFE-201ENST00000375425 1405 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
BMP3P12645 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC16.9■□□□□ 0.3
BMP3P12645 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
BMP3P12645 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
BMP3P12645 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC16.9■□□□□ 0.3
BMP3P12645 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
BMP3P12645 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
BMP3P12645 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
BMP3P12645 C6orf52-201ENST00000259983 619 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
BMP3P12645 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC16.9■□□□□ 0.3
BMP3P12645 AC091046.1-201ENST00000331871 207 ntBASIC16.9■□□□□ 0.3
BMP3P12645 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
BMP3P12645 TCEAL6-201ENST00000372773 983 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
BMP3P12645 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC16.9■□□□□ 0.3
BMP3P12645 AC234782.1-201ENST00000451950 919 ntBASIC16.9■□□□□ 0.3
BMP3P12645 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC16.9■□□□□ 0.3
BMP3P12645 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC16.9■□□□□ 0.3
BMP3P12645 AC124068.2-201ENST00000569473 1109 ntBASIC16.9■□□□□ 0.3
BMP3P12645 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC16.9■□□□□ 0.3
BMP3P12645 MEG3_2.1-201ENST00000611456 105 ntBASIC16.9■□□□□ 0.3
BMP3P12645 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 65.5 ms