Protein–RNA interactions for Protein: O60890

OPHN1, Oligophrenin-1, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPHN1O60890 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
OPHN1O60890 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC15.52■□□□□ 0.07
OPHN1O60890 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
OPHN1O60890 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
OPHN1O60890 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
OPHN1O60890 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
OPHN1O60890 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
OPHN1O60890 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
OPHN1O60890 AL137783.1-201ENST00000623494 1896 ntBASIC15.52■□□□□ 0.07
OPHN1O60890 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC15.52■□□□□ 0.07
OPHN1O60890 MPI-203ENST00000535694 1523 ntTSL 2 BASIC15.52■□□□□ 0.07
OPHN1O60890 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC15.52■□□□□ 0.07
OPHN1O60890 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
OPHN1O60890 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
OPHN1O60890 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
OPHN1O60890 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
OPHN1O60890 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
OPHN1O60890 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
OPHN1O60890 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC15.52■□□□□ 0.07
OPHN1O60890 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC15.51■□□□□ 0.07
OPHN1O60890 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC15.51■□□□□ 0.07
OPHN1O60890 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
OPHN1O60890 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC15.51■□□□□ 0.07
OPHN1O60890 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC15.51■□□□□ 0.07
OPHN1O60890 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
OPHN1O60890 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
OPHN1O60890 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC15.51■□□□□ 0.07
OPHN1O60890 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
OPHN1O60890 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC15.51■□□□□ 0.07
OPHN1O60890 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
OPHN1O60890 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC15.51■□□□□ 0.07
OPHN1O60890 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
OPHN1O60890 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
OPHN1O60890 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
OPHN1O60890 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
OPHN1O60890 AC006033.1-201ENST00000440505 426 ntBASIC15.51■□□□□ 0.07
OPHN1O60890 AC012441.1-201ENST00000446669 685 ntBASIC15.51■□□□□ 0.07
OPHN1O60890 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC15.51■□□□□ 0.07
OPHN1O60890 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
OPHN1O60890 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC15.51■□□□□ 0.07
OPHN1O60890 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
OPHN1O60890 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC15.51■□□□□ 0.07
OPHN1O60890 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC15.51■□□□□ 0.07
OPHN1O60890 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC15.51■□□□□ 0.07
OPHN1O60890 AP001063.1-201ENST00000568332 529 ntBASIC15.51■□□□□ 0.07
OPHN1O60890 ARL16-210ENST00000574938 751 ntTSL 2 BASIC15.51■□□□□ 0.07
OPHN1O60890 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC15.51■□□□□ 0.07
OPHN1O60890 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC15.51■□□□□ 0.07
OPHN1O60890 METTL26-214ENST00000614890 801 ntTSL 3 BASIC15.51■□□□□ 0.07
OPHN1O60890 PPA1-206ENST00000625364 644 ntTSL 5 BASIC15.51■□□□□ 0.07
OPHN1O60890 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
OPHN1O60890 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
OPHN1O60890 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC15.51■□□□□ 0.07
OPHN1O60890 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
OPHN1O60890 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC15.51■□□□□ 0.07
OPHN1O60890 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
OPHN1O60890 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
OPHN1O60890 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC15.51■□□□□ 0.07
OPHN1O60890 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
OPHN1O60890 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
OPHN1O60890 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
OPHN1O60890 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
OPHN1O60890 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
OPHN1O60890 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
OPHN1O60890 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
OPHN1O60890 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
OPHN1O60890 CHD1-212ENST00000614616 8095 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
OPHN1O60890 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC15.51■□□□□ 0.07
OPHN1O60890 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
OPHN1O60890 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
OPHN1O60890 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
OPHN1O60890 WNK1-201ENST00000315939 10452 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
OPHN1O60890 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
OPHN1O60890 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
OPHN1O60890 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
OPHN1O60890 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC15.5■□□□□ 0.07
OPHN1O60890 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC15.5■□□□□ 0.07
OPHN1O60890 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC15.5■□□□□ 0.07
OPHN1O60890 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
OPHN1O60890 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC15.5■□□□□ 0.07
OPHN1O60890 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
OPHN1O60890 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
OPHN1O60890 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
OPHN1O60890 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC15.5■□□□□ 0.07
OPHN1O60890 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
OPHN1O60890 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
OPHN1O60890 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
OPHN1O60890 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
OPHN1O60890 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
OPHN1O60890 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
OPHN1O60890 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
OPHN1O60890 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC15.5■□□□□ 0.07
OPHN1O60890 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
OPHN1O60890 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
OPHN1O60890 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
OPHN1O60890 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
OPHN1O60890 C2orf27AP3-201ENST00000434123 579 ntBASIC15.5■□□□□ 0.07
OPHN1O60890 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC15.5■□□□□ 0.07
OPHN1O60890 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC15.5■□□□□ 0.07
OPHN1O60890 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms