Protein–RNA interactions for Protein: Q9UBT3

DKK4, Dickkopf-related protein 4, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKK4Q9UBT3 PDHB-201ENST00000302746 1527 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
DKK4Q9UBT3 MPI-203ENST00000535694 1523 ntTSL 2 BASIC13.49□□□□□ -0.25
DKK4Q9UBT3 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
DKK4Q9UBT3 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
DKK4Q9UBT3 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC13.48□□□□□ -0.25
DKK4Q9UBT3 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
DKK4Q9UBT3 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC13.48□□□□□ -0.25
DKK4Q9UBT3 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
DKK4Q9UBT3 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC13.48□□□□□ -0.25
DKK4Q9UBT3 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
DKK4Q9UBT3 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
DKK4Q9UBT3 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC13.48□□□□□ -0.25
DKK4Q9UBT3 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC13.48□□□□□ -0.25
DKK4Q9UBT3 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
DKK4Q9UBT3 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
DKK4Q9UBT3 UBOX5-AS1-201ENST00000446537 1792 ntTSL 2 BASIC13.48□□□□□ -0.25
DKK4Q9UBT3 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC13.48□□□□□ -0.25
DKK4Q9UBT3 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC13.48□□□□□ -0.25
DKK4Q9UBT3 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
DKK4Q9UBT3 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC13.48□□□□□ -0.25
DKK4Q9UBT3 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC13.48□□□□□ -0.25
DKK4Q9UBT3 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
DKK4Q9UBT3 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
DKK4Q9UBT3 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC13.48□□□□□ -0.25
DKK4Q9UBT3 SNRPC-201ENST00000244520 842 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
DKK4Q9UBT3 GALP-201ENST00000357330 938 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
DKK4Q9UBT3 PIFO-201ENST00000369737 746 ntTSL 2 BASIC13.48□□□□□ -0.25
DKK4Q9UBT3 BAX-205ENST00000391871 687 ntTSL 5 BASIC13.48□□□□□ -0.25
DKK4Q9UBT3 TMEM216-202ENST00000398979 908 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
DKK4Q9UBT3 SIX3-AS1-201ENST00000419364 844 ntTSL 2 BASIC13.48□□□□□ -0.25
DKK4Q9UBT3 BX248123.1-201ENST00000429070 606 ntTSL 3 BASIC13.48□□□□□ -0.25
DKK4Q9UBT3 IFI35-204ENST00000438323 1232 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
DKK4Q9UBT3 CDK2-203ENST00000440311 1031 ntTSL 2 BASIC13.48□□□□□ -0.25
DKK4Q9UBT3 GALP-202ENST00000440823 889 ntTSL 5 BASIC13.48□□□□□ -0.25
DKK4Q9UBT3 AC087071.1-201ENST00000469264 427 ntTSL 2 BASIC13.48□□□□□ -0.25
DKK4Q9UBT3 RN7SL288P-201ENST00000490496 291 ntBASIC13.48□□□□□ -0.25
DKK4Q9UBT3 TRPC7-AS1-201ENST00000514459 460 ntTSL 3 BASIC13.48□□□□□ -0.25
DKK4Q9UBT3 AC009163.3-201ENST00000563554 852 ntTSL 3 BASIC13.48□□□□□ -0.25
DKK4Q9UBT3 SKA2-205ENST00000580541 689 ntTSL 3 BASIC13.48□□□□□ -0.25
DKK4Q9UBT3 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC13.48□□□□□ -0.25
DKK4Q9UBT3 AP005264.5-201ENST00000590066 467 ntBASIC13.48□□□□□ -0.25
DKK4Q9UBT3 ANKRD36C-208ENST00000619511 737 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
DKK4Q9UBT3 PSMA6-215ENST00000622405 978 ntTSL 2 BASIC13.48□□□□□ -0.25
DKK4Q9UBT3 AC090386.2-201ENST00000623010 1039 ntBASIC13.48□□□□□ -0.25
DKK4Q9UBT3 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
DKK4Q9UBT3 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
DKK4Q9UBT3 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
DKK4Q9UBT3 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
DKK4Q9UBT3 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
DKK4Q9UBT3 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
DKK4Q9UBT3 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
DKK4Q9UBT3 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC13.48□□□□□ -0.25
DKK4Q9UBT3 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
DKK4Q9UBT3 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
DKK4Q9UBT3 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
DKK4Q9UBT3 CR382285.1-201ENST00000625012 1485 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
DKK4Q9UBT3 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
DKK4Q9UBT3 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC13.47□□□□□ -0.25
DKK4Q9UBT3 NECTIN1-203ENST00000341398 1377 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
DKK4Q9UBT3 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
DKK4Q9UBT3 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
DKK4Q9UBT3 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
DKK4Q9UBT3 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
DKK4Q9UBT3 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
DKK4Q9UBT3 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC13.47□□□□□ -0.25
DKK4Q9UBT3 TSPAN3-205ENST00000558745 1340 ntTSL 5 BASIC13.47□□□□□ -0.25
DKK4Q9UBT3 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
DKK4Q9UBT3 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
DKK4Q9UBT3 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC13.47□□□□□ -0.25
DKK4Q9UBT3 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
DKK4Q9UBT3 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
DKK4Q9UBT3 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
DKK4Q9UBT3 UPK1A-201ENST00000222275 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
DKK4Q9UBT3 VEGFA-201ENST00000230480 993 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
DKK4Q9UBT3 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC13.47□□□□□ -0.25
DKK4Q9UBT3 LCN6-201ENST00000341206 717 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
DKK4Q9UBT3 AQP7-202ENST00000377425 1068 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
DKK4Q9UBT3 UPK1A-202ENST00000379013 1016 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
DKK4Q9UBT3 NSD2-209ENST00000436793 835 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
DKK4Q9UBT3 AC002127.2-201ENST00000444032 792 ntTSL 3 BASIC13.47□□□□□ -0.25
DKK4Q9UBT3 GLUD1P3-201ENST00000507952 896 ntTSL 2 BASIC13.47□□□□□ -0.25
DKK4Q9UBT3 AADAT-206ENST00000509167 2113 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
DKK4Q9UBT3 RBM4-211ENST00000530235 1011 ntTSL 3 BASIC13.47□□□□□ -0.25
DKK4Q9UBT3 PMFBP1-208ENST00000537792 955 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
DKK4Q9UBT3 PMEL-214ENST00000550447 901 ntTSL 3 BASIC13.47□□□□□ -0.25
DKK4Q9UBT3 DUT-207ENST00000559416 635 ntTSL 2 BASIC13.47□□□□□ -0.25
DKK4Q9UBT3 TNFRSF12A-204ENST00000573001 648 ntTSL 3 BASIC13.47□□□□□ -0.25
DKK4Q9UBT3 TYMSP2-201ENST00000589501 424 ntBASIC13.47□□□□□ -0.25
DKK4Q9UBT3 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
DKK4Q9UBT3 BRD7P5-201ENST00000299197 1822 ntBASIC13.47□□□□□ -0.25
DKK4Q9UBT3 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC13.47□□□□□ -0.25
DKK4Q9UBT3 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
DKK4Q9UBT3 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC13.47□□□□□ -0.25
DKK4Q9UBT3 AGGF1P1-201ENST00000509500 2073 ntBASIC13.47□□□□□ -0.25
DKK4Q9UBT3 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC13.47□□□□□ -0.25
DKK4Q9UBT3 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
DKK4Q9UBT3 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
DKK4Q9UBT3 VDAC2-202ENST00000313132 1467 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
DKK4Q9UBT3 AC013726.1-201ENST00000563747 2285 ntBASIC13.47□□□□□ -0.25
DKK4Q9UBT3 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms