Protein–RNA interactions for Protein: Q9NPL8

TIMMDC1, Complex I assembly factor TIMMDC1, mitochondrial, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMMDC1Q9NPL8 SIPA1L3-201ENST00000222345 7987 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TIMMDC1Q9NPL8 KIRREL3-205ENST00000529097 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
TIMMDC1Q9NPL8 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC14.35□□□□□ -0.11
TIMMDC1Q9NPL8 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TIMMDC1Q9NPL8 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
TIMMDC1Q9NPL8 AL133267.1-201ENST00000398220 340 ntBASIC14.35□□□□□ -0.11
TIMMDC1Q9NPL8 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC14.35□□□□□ -0.11
TIMMDC1Q9NPL8 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC14.35□□□□□ -0.11
TIMMDC1Q9NPL8 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC14.35□□□□□ -0.11
TIMMDC1Q9NPL8 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC14.35□□□□□ -0.11
TIMMDC1Q9NPL8 GLI4-203ENST00000517468 963 ntTSL 5 BASIC14.35□□□□□ -0.11
TIMMDC1Q9NPL8 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TIMMDC1Q9NPL8 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC14.35□□□□□ -0.11
TIMMDC1Q9NPL8 PAM16-204ENST00000571941 674 ntTSL 3 BASIC14.35□□□□□ -0.11
TIMMDC1Q9NPL8 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC14.35□□□□□ -0.11
TIMMDC1Q9NPL8 AL049840.4-201ENST00000602422 811 ntBASIC14.35□□□□□ -0.11
TIMMDC1Q9NPL8 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC14.35□□□□□ -0.11
TIMMDC1Q9NPL8 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC14.35□□□□□ -0.11
TIMMDC1Q9NPL8 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC14.35□□□□□ -0.11
TIMMDC1Q9NPL8 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
TIMMDC1Q9NPL8 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC14.35□□□□□ -0.11
TIMMDC1Q9NPL8 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
TIMMDC1Q9NPL8 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TIMMDC1Q9NPL8 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TIMMDC1Q9NPL8 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TIMMDC1Q9NPL8 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
TIMMDC1Q9NPL8 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC14.35□□□□□ -0.11
TIMMDC1Q9NPL8 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TIMMDC1Q9NPL8 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
TIMMDC1Q9NPL8 STRN-202ENST00000379213 2254 ntTSL 5 BASIC14.35□□□□□ -0.11
TIMMDC1Q9NPL8 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TIMMDC1Q9NPL8 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
TIMMDC1Q9NPL8 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TIMMDC1Q9NPL8 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TIMMDC1Q9NPL8 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TIMMDC1Q9NPL8 ZNF519-206ENST00000589498 2117 ntTSL 2 BASIC14.35□□□□□ -0.11
TIMMDC1Q9NPL8 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC14.35□□□□□ -0.11
TIMMDC1Q9NPL8 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
TIMMDC1Q9NPL8 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TIMMDC1Q9NPL8 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC14.34□□□□□ -0.11
TIMMDC1Q9NPL8 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TIMMDC1Q9NPL8 DCST2-202ENST00000368424 2392 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TIMMDC1Q9NPL8 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TIMMDC1Q9NPL8 PCDHB5-201ENST00000231134 3408 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
TIMMDC1Q9NPL8 CHMP7-202ENST00000397677 3403 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TIMMDC1Q9NPL8 EGR2-202ENST00000411732 2824 ntTSL 2 BASIC14.34□□□□□ -0.11
TIMMDC1Q9NPL8 INTS4P2-202ENST00000614726 2019 ntBASIC14.34□□□□□ -0.11
TIMMDC1Q9NPL8 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
TIMMDC1Q9NPL8 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
TIMMDC1Q9NPL8 OFD1-202ENST00000380550 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
TIMMDC1Q9NPL8 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
TIMMDC1Q9NPL8 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
TIMMDC1Q9NPL8 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC14.34□□□□□ -0.11
TIMMDC1Q9NPL8 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TIMMDC1Q9NPL8 TK1-203ENST00000588734 1681 ntTSL 2 BASIC14.34□□□□□ -0.11
TIMMDC1Q9NPL8 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TIMMDC1Q9NPL8 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TIMMDC1Q9NPL8 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TIMMDC1Q9NPL8 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TIMMDC1Q9NPL8 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
TIMMDC1Q9NPL8 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
TIMMDC1Q9NPL8 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
TIMMDC1Q9NPL8 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
TIMMDC1Q9NPL8 HCG24-202ENST00000414398 717 ntTSL 3 BASIC14.34□□□□□ -0.11
TIMMDC1Q9NPL8 SOCS2P1-201ENST00000417727 557 ntBASIC14.34□□□□□ -0.11
TIMMDC1Q9NPL8 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC14.34□□□□□ -0.11
TIMMDC1Q9NPL8 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC14.34□□□□□ -0.11
TIMMDC1Q9NPL8 ENPP7P5-201ENST00000541031 1031 ntBASIC14.34□□□□□ -0.11
TIMMDC1Q9NPL8 MIR4313-201ENST00000580760 101 ntBASIC14.34□□□□□ -0.11
TIMMDC1Q9NPL8 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC14.34□□□□□ -0.11
TIMMDC1Q9NPL8 AC015936.2-201ENST00000593177 259 ntBASIC14.34□□□□□ -0.11
TIMMDC1Q9NPL8 AC000095.1-201ENST00000603208 874 ntBASIC14.34□□□□□ -0.11
TIMMDC1Q9NPL8 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC14.34□□□□□ -0.11
TIMMDC1Q9NPL8 HNF1B-204ENST00000617811 2977 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TIMMDC1Q9NPL8 CU634019.7-201ENST00000624153 1185 ntBASIC14.34□□□□□ -0.11
TIMMDC1Q9NPL8 FP236241.2-201ENST00000624906 1185 ntBASIC14.34□□□□□ -0.11
TIMMDC1Q9NPL8 CPT1C-202ENST00000323446 2783 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
TIMMDC1Q9NPL8 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
TIMMDC1Q9NPL8 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
TIMMDC1Q9NPL8 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
TIMMDC1Q9NPL8 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
TIMMDC1Q9NPL8 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TIMMDC1Q9NPL8 RUNX3-203ENST00000399916 4340 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
TIMMDC1Q9NPL8 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TIMMDC1Q9NPL8 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
TIMMDC1Q9NPL8 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TIMMDC1Q9NPL8 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
TIMMDC1Q9NPL8 TRIM10-204ENST00000449742 3546 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TIMMDC1Q9NPL8 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC14.34□□□□□ -0.11
TIMMDC1Q9NPL8 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TIMMDC1Q9NPL8 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TIMMDC1Q9NPL8 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC14.34□□□□□ -0.11
TIMMDC1Q9NPL8 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
TIMMDC1Q9NPL8 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC14.34□□□□□ -0.11
TIMMDC1Q9NPL8 RPS6KA2-204ENST00000481261 2297 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TIMMDC1Q9NPL8 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC14.34□□□□□ -0.11
TIMMDC1Q9NPL8 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC14.34□□□□□ -0.11
TIMMDC1Q9NPL8 FFAR4-202ENST00000371483 3653 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TIMMDC1Q9NPL8 LINC01792-201ENST00000452787 2050 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TIMMDC1Q9NPL8 TRIB2-202ENST00000381465 2778 ntTSL 2 BASIC14.34□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms