Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
VGLL1Q99990 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
VGLL1Q99990 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC11.3□□□□□ -0.6
VGLL1Q99990 TMPRSS3-203ENST00000398405 2754 ntAPPRIS ALT1 TSL 5 BASIC11.3□□□□□ -0.6
VGLL1Q99990 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
VGLL1Q99990 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
VGLL1Q99990 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
VGLL1Q99990 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC11.3□□□□□ -0.6
VGLL1Q99990 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
VGLL1Q99990 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC11.3□□□□□ -0.6
VGLL1Q99990 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
VGLL1Q99990 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
VGLL1Q99990 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
VGLL1Q99990 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
VGLL1Q99990 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
VGLL1Q99990 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC11.29□□□□□ -0.6
VGLL1Q99990 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
VGLL1Q99990 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
VGLL1Q99990 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC11.29□□□□□ -0.6
VGLL1Q99990 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC11.29□□□□□ -0.6
VGLL1Q99990 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
VGLL1Q99990 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
VGLL1Q99990 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
VGLL1Q99990 RSBN1L-201ENST00000334955 6422 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
VGLL1Q99990 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
VGLL1Q99990 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
VGLL1Q99990 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC11.29□□□□□ -0.6
VGLL1Q99990 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC11.29□□□□□ -0.6
VGLL1Q99990 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC11.29□□□□□ -0.6
VGLL1Q99990 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
VGLL1Q99990 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
VGLL1Q99990 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC11.29□□□□□ -0.6
VGLL1Q99990 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC11.29□□□□□ -0.6
VGLL1Q99990 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
VGLL1Q99990 SNPH-201ENST00000381867 5533 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
VGLL1Q99990 AC093668.2-201ENST00000481893 3569 ntTSL 2 BASIC11.29□□□□□ -0.6
VGLL1Q99990 AC105052.1-201ENST00000519541 3569 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
VGLL1Q99990 AC012617.1-204ENST00000586340 2305 ntBASIC11.29□□□□□ -0.6
VGLL1Q99990 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
VGLL1Q99990 GAS6-AS1-201ENST00000458001 7169 ntTSL 5 BASIC11.29□□□□□ -0.6
VGLL1Q99990 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
VGLL1Q99990 ALX4-201ENST00000329255 5750 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
VGLL1Q99990 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC11.29□□□□□ -0.6
VGLL1Q99990 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
VGLL1Q99990 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
VGLL1Q99990 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
VGLL1Q99990 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
VGLL1Q99990 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
VGLL1Q99990 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC11.29□□□□□ -0.6
VGLL1Q99990 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC11.29□□□□□ -0.6
VGLL1Q99990 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
VGLL1Q99990 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
VGLL1Q99990 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC11.29□□□□□ -0.6
VGLL1Q99990 TREML5P-201ENST00000421694 576 ntBASIC11.29□□□□□ -0.6
VGLL1Q99990 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC11.29□□□□□ -0.6
VGLL1Q99990 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC11.29□□□□□ -0.6
VGLL1Q99990 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC11.29□□□□□ -0.6
VGLL1Q99990 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC11.29□□□□□ -0.6
VGLL1Q99990 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC11.29□□□□□ -0.6
VGLL1Q99990 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC11.29□□□□□ -0.6
VGLL1Q99990 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC11.29□□□□□ -0.6
VGLL1Q99990 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
VGLL1Q99990 RPS15-202ENST00000585665 467 ntTSL 3 BASIC11.29□□□□□ -0.6
VGLL1Q99990 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
VGLL1Q99990 AL391069.4-201ENST00000609583 481 ntBASIC11.29□□□□□ -0.6
VGLL1Q99990 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
VGLL1Q99990 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC11.29□□□□□ -0.6
VGLL1Q99990 AC073957.3-201ENST00000609998 6758 ntBASIC11.29□□□□□ -0.6
VGLL1Q99990 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC11.29□□□□□ -0.6
VGLL1Q99990 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
VGLL1Q99990 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
VGLL1Q99990 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
VGLL1Q99990 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
VGLL1Q99990 NFATC2-203ENST00000414705 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
VGLL1Q99990 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
VGLL1Q99990 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
VGLL1Q99990 SLC6A6P1-201ENST00000413933 1850 ntBASIC11.29□□□□□ -0.6
VGLL1Q99990 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC11.29□□□□□ -0.6
VGLL1Q99990 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
VGLL1Q99990 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
VGLL1Q99990 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
VGLL1Q99990 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
VGLL1Q99990 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC11.29□□□□□ -0.6
VGLL1Q99990 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC11.29□□□□□ -0.6
VGLL1Q99990 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
VGLL1Q99990 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC11.29□□□□□ -0.6
VGLL1Q99990 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
VGLL1Q99990 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
VGLL1Q99990 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
VGLL1Q99990 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
VGLL1Q99990 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
VGLL1Q99990 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
VGLL1Q99990 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC11.29□□□□□ -0.6
VGLL1Q99990 AC113189.2-201ENST00000575310 1975 ntTSL 2 BASIC11.28□□□□□ -0.6
VGLL1Q99990 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
VGLL1Q99990 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
VGLL1Q99990 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
VGLL1Q99990 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
VGLL1Q99990 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
VGLL1Q99990 AC089987.1-201ENST00000551654 2209 ntBASIC11.28□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 68.1 ms