Protein–RNA interactions for Protein: Q8WVD3

RNF138, E3 ubiquitin-protein ligase RNF138, humanhuman

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF138Q8WVD3 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
RNF138Q8WVD3 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RNF138Q8WVD3 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RNF138Q8WVD3 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
RNF138Q8WVD3 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
RNF138Q8WVD3 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RNF138Q8WVD3 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
RNF138Q8WVD3 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
RNF138Q8WVD3 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RNF138Q8WVD3 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC13.19□□□□□ -0.3
RNF138Q8WVD3 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
RNF138Q8WVD3 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
RNF138Q8WVD3 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
RNF138Q8WVD3 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC13.18□□□□□ -0.3
RNF138Q8WVD3 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
RNF138Q8WVD3 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
RNF138Q8WVD3 AL022313.4-201ENST00000562756 2046 ntBASIC13.18□□□□□ -0.3
RNF138Q8WVD3 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
RNF138Q8WVD3 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC13.18□□□□□ -0.3
RNF138Q8WVD3 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
RNF138Q8WVD3 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
RNF138Q8WVD3 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
RNF138Q8WVD3 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
RNF138Q8WVD3 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
RNF138Q8WVD3 KRT8P21-201ENST00000430398 1491 ntBASIC13.18□□□□□ -0.3
RNF138Q8WVD3 RAN-210ENST00000541630 1475 ntTSL 2 BASIC13.18□□□□□ -0.3
RNF138Q8WVD3 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
RNF138Q8WVD3 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
RNF138Q8WVD3 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
RNF138Q8WVD3 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
RNF138Q8WVD3 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC13.18□□□□□ -0.3
RNF138Q8WVD3 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC13.18□□□□□ -0.3
RNF138Q8WVD3 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC13.18□□□□□ -0.3
RNF138Q8WVD3 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
RNF138Q8WVD3 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC13.18□□□□□ -0.3
RNF138Q8WVD3 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
RNF138Q8WVD3 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC13.18□□□□□ -0.3
RNF138Q8WVD3 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC13.18□□□□□ -0.3
RNF138Q8WVD3 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
RNF138Q8WVD3 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
RNF138Q8WVD3 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
RNF138Q8WVD3 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC13.18□□□□□ -0.3
RNF138Q8WVD3 REEP1-202ENST00000453231 940 ntTSL 2 BASIC13.18□□□□□ -0.3
RNF138Q8WVD3 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
RNF138Q8WVD3 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
RNF138Q8WVD3 RERG-205ENST00000537647 935 ntTSL 2 BASIC13.18□□□□□ -0.3
RNF138Q8WVD3 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC13.18□□□□□ -0.3
RNF138Q8WVD3 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC13.18□□□□□ -0.3
RNF138Q8WVD3 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC13.18□□□□□ -0.3
RNF138Q8WVD3 AC099684.2-201ENST00000574520 870 ntTSL 5 BASIC13.18□□□□□ -0.3
RNF138Q8WVD3 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
RNF138Q8WVD3 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
RNF138Q8WVD3 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
RNF138Q8WVD3 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
RNF138Q8WVD3 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
RNF138Q8WVD3 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
RNF138Q8WVD3 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC13.18□□□□□ -0.3
RNF138Q8WVD3 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
RNF138Q8WVD3 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC13.18□□□□□ -0.3
RNF138Q8WVD3 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
RNF138Q8WVD3 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC13.18□□□□□ -0.3
RNF138Q8WVD3 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
RNF138Q8WVD3 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
RNF138Q8WVD3 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RNF138Q8WVD3 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
RNF138Q8WVD3 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RNF138Q8WVD3 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RNF138Q8WVD3 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RNF138Q8WVD3 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
RNF138Q8WVD3 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
RNF138Q8WVD3 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RNF138Q8WVD3 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
RNF138Q8WVD3 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
RNF138Q8WVD3 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RNF138Q8WVD3 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RNF138Q8WVD3 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RNF138Q8WVD3 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC13.17□□□□□ -0.3
RNF138Q8WVD3 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RNF138Q8WVD3 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RNF138Q8WVD3 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC13.17□□□□□ -0.3
RNF138Q8WVD3 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RNF138Q8WVD3 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
RNF138Q8WVD3 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RNF138Q8WVD3 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC13.17□□□□□ -0.3
RNF138Q8WVD3 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
RNF138Q8WVD3 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RNF138Q8WVD3 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
RNF138Q8WVD3 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC13.17□□□□□ -0.3
RNF138Q8WVD3 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RNF138Q8WVD3 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC13.17□□□□□ -0.3
RNF138Q8WVD3 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RNF138Q8WVD3 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
RNF138Q8WVD3 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RNF138Q8WVD3 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RNF138Q8WVD3 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
RNF138Q8WVD3 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC13.17□□□□□ -0.3
RNF138Q8WVD3 TSPY25P-201ENST00000429463 745 ntBASIC13.17□□□□□ -0.3
RNF138Q8WVD3 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC13.17□□□□□ -0.3
RNF138Q8WVD3 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC13.17□□□□□ -0.3
RNF138Q8WVD3 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC13.17□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms