Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 Z98259.2-201ENST00000641583 609 ntBASIC15.73■□□□□ 0.11
LMO3Q8TAP4 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
LMO3Q8TAP4 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
LMO3Q8TAP4 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
LMO3Q8TAP4 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
LMO3Q8TAP4 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
LMO3Q8TAP4 AL022313.4-201ENST00000562756 2046 ntBASIC15.73■□□□□ 0.11
LMO3Q8TAP4 AC090643.2-201ENST00000623442 2029 ntBASIC15.73■□□□□ 0.11
LMO3Q8TAP4 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
LMO3Q8TAP4 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC15.73■□□□□ 0.11
LMO3Q8TAP4 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
LMO3Q8TAP4 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
LMO3Q8TAP4 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
LMO3Q8TAP4 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC15.73■□□□□ 0.11
LMO3Q8TAP4 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
LMO3Q8TAP4 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
LMO3Q8TAP4 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
LMO3Q8TAP4 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC15.73■□□□□ 0.11
LMO3Q8TAP4 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
LMO3Q8TAP4 DDC-213ENST00000617822 1809 ntTSL 3 BASIC15.73■□□□□ 0.11
LMO3Q8TAP4 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
LMO3Q8TAP4 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
LMO3Q8TAP4 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
LMO3Q8TAP4 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC15.72■□□□□ 0.11
LMO3Q8TAP4 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
LMO3Q8TAP4 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
LMO3Q8TAP4 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
LMO3Q8TAP4 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC15.72■□□□□ 0.11
LMO3Q8TAP4 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC15.72■□□□□ 0.11
LMO3Q8TAP4 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
LMO3Q8TAP4 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC15.72■□□□□ 0.11
LMO3Q8TAP4 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
LMO3Q8TAP4 FAS-202ENST00000352159 1722 ntTSL 5 BASIC15.72■□□□□ 0.11
LMO3Q8TAP4 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
LMO3Q8TAP4 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC15.72■□□□□ 0.11
LMO3Q8TAP4 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
LMO3Q8TAP4 RPF1-202ENST00000370656 724 ntTSL 2 BASIC15.72■□□□□ 0.11
LMO3Q8TAP4 STX1A-203ENST00000395155 783 ntTSL 2 BASIC15.72■□□□□ 0.11
LMO3Q8TAP4 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
LMO3Q8TAP4 OLR1-203ENST00000432556 950 ntTSL 2 BASIC15.72■□□□□ 0.11
LMO3Q8TAP4 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
LMO3Q8TAP4 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC15.72■□□□□ 0.11
LMO3Q8TAP4 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC15.72■□□□□ 0.11
LMO3Q8TAP4 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC15.72■□□□□ 0.11
LMO3Q8TAP4 CYGB-203ENST00000589145 788 ntTSL 3 BASIC15.72■□□□□ 0.11
LMO3Q8TAP4 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
LMO3Q8TAP4 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
LMO3Q8TAP4 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC15.72■□□□□ 0.11
LMO3Q8TAP4 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC15.72■□□□□ 0.11
LMO3Q8TAP4 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC15.72■□□□□ 0.11
LMO3Q8TAP4 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
LMO3Q8TAP4 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC15.72■□□□□ 0.11
LMO3Q8TAP4 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
LMO3Q8TAP4 OS9-207ENST00000439210 1946 ntTSL 2 BASIC15.72■□□□□ 0.11
LMO3Q8TAP4 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
LMO3Q8TAP4 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
LMO3Q8TAP4 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
LMO3Q8TAP4 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC15.71■□□□□ 0.11
LMO3Q8TAP4 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC15.71■□□□□ 0.11
LMO3Q8TAP4 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
LMO3Q8TAP4 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LMO3Q8TAP4 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC15.71■□□□□ 0.11
LMO3Q8TAP4 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LMO3Q8TAP4 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
LMO3Q8TAP4 AL008718.2-201ENST00000609206 1313 ntBASIC15.71■□□□□ 0.11
LMO3Q8TAP4 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LMO3Q8TAP4 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
LMO3Q8TAP4 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LMO3Q8TAP4 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC15.71■□□□□ 0.11
LMO3Q8TAP4 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LMO3Q8TAP4 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
LMO3Q8TAP4 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
LMO3Q8TAP4 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LMO3Q8TAP4 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LMO3Q8TAP4 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LMO3Q8TAP4 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
LMO3Q8TAP4 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC15.71■□□□□ 0.11
LMO3Q8TAP4 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LMO3Q8TAP4 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
LMO3Q8TAP4 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC15.71■□□□□ 0.11
LMO3Q8TAP4 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LMO3Q8TAP4 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC15.71■□□□□ 0.11
LMO3Q8TAP4 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
LMO3Q8TAP4 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC15.71■□□□□ 0.11
LMO3Q8TAP4 ACR-203ENST00000529621 708 ntTSL 5 BASIC15.71■□□□□ 0.11
LMO3Q8TAP4 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC15.71■□□□□ 0.11
LMO3Q8TAP4 MIR4741-201ENST00000579822 90 ntBASIC15.71■□□□□ 0.11
LMO3Q8TAP4 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
LMO3Q8TAP4 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC15.71■□□□□ 0.11
LMO3Q8TAP4 MIR6720-201ENST00000611664 98 ntBASIC15.71■□□□□ 0.11
LMO3Q8TAP4 AL162426.1-201ENST00000624141 743 ntBASIC15.71■□□□□ 0.11
LMO3Q8TAP4 COX11-210ENST00000639671 696 ntBASIC15.71■□□□□ 0.11
LMO3Q8TAP4 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC15.71■□□□□ 0.11
LMO3Q8TAP4 REXO1L6P-201ENST00000603433 1515 ntBASIC15.71■□□□□ 0.11
LMO3Q8TAP4 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LMO3Q8TAP4 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LMO3Q8TAP4 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
LMO3Q8TAP4 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.1
LMO3Q8TAP4 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC15.71■□□□□ 0.1
LMO3Q8TAP4 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC15.71■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms