Protein–RNA interactions for Protein: P61009

SPCS3, Signal peptidase complex subunit 3, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3P61009 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC12.14□□□□□ -0.47
SPCS3P61009 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SPCS3P61009 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
SPCS3P61009 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
SPCS3P61009 CILP2-201ENST00000291495 4199 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
SPCS3P61009 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
SPCS3P61009 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC12.14□□□□□ -0.47
SPCS3P61009 STRA6-206ENST00000449139 2732 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
SPCS3P61009 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
SPCS3P61009 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC12.14□□□□□ -0.47
SPCS3P61009 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC12.14□□□□□ -0.47
SPCS3P61009 RAP2B-201ENST00000323534 8351 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
SPCS3P61009 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SPCS3P61009 SPPL2B-209ENST00000613503 3456 ntAPPRIS P4 TSL 1 (best) BASIC12.14□□□□□ -0.47
SPCS3P61009 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC12.14□□□□□ -0.47
SPCS3P61009 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
SPCS3P61009 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SPCS3P61009 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
SPCS3P61009 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
SPCS3P61009 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
SPCS3P61009 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC12.14□□□□□ -0.47
SPCS3P61009 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
SPCS3P61009 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC12.14□□□□□ -0.47
SPCS3P61009 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC12.14□□□□□ -0.47
SPCS3P61009 PPP6R2P1-201ENST00000450880 1275 ntBASIC12.14□□□□□ -0.47
SPCS3P61009 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC12.14□□□□□ -0.47
SPCS3P61009 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC12.14□□□□□ -0.47
SPCS3P61009 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC12.14□□□□□ -0.47
SPCS3P61009 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC12.14□□□□□ -0.47
SPCS3P61009 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC12.14□□□□□ -0.47
SPCS3P61009 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
SPCS3P61009 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
SPCS3P61009 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC12.14□□□□□ -0.47
SPCS3P61009 AL138828.2-201ENST00000615812 383 ntBASIC12.14□□□□□ -0.47
SPCS3P61009 SPDYE12P-201ENST00000618416 771 ntBASIC12.14□□□□□ -0.47
SPCS3P61009 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC12.14□□□□□ -0.47
SPCS3P61009 RAB34-223ENST00000636154 730 ntTSL 2 BASIC12.14□□□□□ -0.47
SPCS3P61009 HGNC:18790-201ENST00000397958 2650 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
SPCS3P61009 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC12.14□□□□□ -0.47
SPCS3P61009 NLRP2B-201ENST00000434992 3194 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
SPCS3P61009 NPTN-IT1-201ENST00000628401 2283 ntBASIC12.14□□□□□ -0.47
SPCS3P61009 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SPCS3P61009 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC12.14□□□□□ -0.47
SPCS3P61009 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
SPCS3P61009 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
SPCS3P61009 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
SPCS3P61009 RERG-209ENST00000546331 1383 ntTSL 2 BASIC12.14□□□□□ -0.47
SPCS3P61009 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC12.14□□□□□ -0.47
SPCS3P61009 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC12.14□□□□□ -0.47
SPCS3P61009 MX1-218ENST00000619682 1980 ntTSL 5 BASIC12.14□□□□□ -0.47
SPCS3P61009 AC040174.1-201ENST00000563003 2571 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
SPCS3P61009 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
SPCS3P61009 AGGF1P1-201ENST00000509500 2073 ntBASIC12.14□□□□□ -0.47
SPCS3P61009 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC12.14□□□□□ -0.47
SPCS3P61009 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC12.13□□□□□ -0.47
SPCS3P61009 ACIN1-202ENST00000338631 2445 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
SPCS3P61009 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
SPCS3P61009 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
SPCS3P61009 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC12.13□□□□□ -0.47
SPCS3P61009 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
SPCS3P61009 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SPCS3P61009 PRDM16-201ENST00000270722 8690 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
SPCS3P61009 TUBB3P1-201ENST00000405796 1332 ntBASIC12.13□□□□□ -0.47
SPCS3P61009 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
SPCS3P61009 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC12.13□□□□□ -0.47
SPCS3P61009 UBE3A-228ENST00000638155 9131 ntAPPRIS P3 TSL 5 BASIC12.13□□□□□ -0.47
SPCS3P61009 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SPCS3P61009 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC12.13□□□□□ -0.47
SPCS3P61009 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
SPCS3P61009 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SPCS3P61009 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
SPCS3P61009 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC12.13□□□□□ -0.47
SPCS3P61009 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC12.13□□□□□ -0.47
SPCS3P61009 AC027020.2-201ENST00000602585 2389 ntBASIC12.13□□□□□ -0.47
SPCS3P61009 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
SPCS3P61009 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC12.13□□□□□ -0.47
SPCS3P61009 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SPCS3P61009 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
SPCS3P61009 SUSD6-201ENST00000342745 5388 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SPCS3P61009 ITPR2-202ENST00000381340 11405 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SPCS3P61009 WIZ-202ENST00000389282 4067 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
SPCS3P61009 FAM120B-205ENST00000630384 3721 ntAPPRIS ALT2 TSL 2 BASIC12.13□□□□□ -0.47
SPCS3P61009 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SPCS3P61009 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC12.13□□□□□ -0.47
SPCS3P61009 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
SPCS3P61009 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
SPCS3P61009 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
SPCS3P61009 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC12.13□□□□□ -0.47
SPCS3P61009 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC12.13□□□□□ -0.47
SPCS3P61009 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC12.13□□□□□ -0.47
SPCS3P61009 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC12.13□□□□□ -0.47
SPCS3P61009 SLBP-205ENST00000488267 987 ntTSL 2 BASIC12.13□□□□□ -0.47
SPCS3P61009 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC12.13□□□□□ -0.47
SPCS3P61009 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC12.13□□□□□ -0.47
SPCS3P61009 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC12.13□□□□□ -0.47
SPCS3P61009 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC12.13□□□□□ -0.47
SPCS3P61009 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC12.13□□□□□ -0.47
SPCS3P61009 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC12.13□□□□□ -0.47
SPCS3P61009 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC12.13□□□□□ -0.47
SPCS3P61009 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC12.13□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 58.2 ms