Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC13.64□□□□□ -0.23
CDH11P55287 TTTY23B-201ENST00000442790 549 ntBASIC13.64□□□□□ -0.23
CDH11P55287 RHOA-206ENST00000454011 889 ntTSL 2 BASIC13.64□□□□□ -0.23
CDH11P55287 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC13.64□□□□□ -0.23
CDH11P55287 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC13.64□□□□□ -0.23
CDH11P55287 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC13.64□□□□□ -0.23
CDH11P55287 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CDH11P55287 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC13.64□□□□□ -0.23
CDH11P55287 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
CDH11P55287 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
CDH11P55287 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CDH11P55287 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CDH11P55287 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CDH11P55287 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CDH11P55287 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
CDH11P55287 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
CDH11P55287 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CDH11P55287 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC13.64□□□□□ -0.23
CDH11P55287 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CDH11P55287 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
CDH11P55287 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
CDH11P55287 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CDH11P55287 AL157414.3-201ENST00000624276 1954 ntBASIC13.63□□□□□ -0.23
CDH11P55287 PLIN4-201ENST00000301286 6353 ntAPPRIS P2 TSL 5 BASIC13.63□□□□□ -0.23
CDH11P55287 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CDH11P55287 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC13.63□□□□□ -0.23
CDH11P55287 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
CDH11P55287 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CDH11P55287 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
CDH11P55287 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CDH11P55287 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CDH11P55287 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CDH11P55287 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC13.63□□□□□ -0.23
CDH11P55287 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CDH11P55287 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CDH11P55287 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC13.63□□□□□ -0.23
CDH11P55287 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
CDH11P55287 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
CDH11P55287 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CDH11P55287 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CDH11P55287 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
CDH11P55287 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CDH11P55287 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
CDH11P55287 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CDH11P55287 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC13.63□□□□□ -0.23
CDH11P55287 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC13.63□□□□□ -0.23
CDH11P55287 U91328.1-201ENST00000437528 223 ntBASIC13.63□□□□□ -0.23
CDH11P55287 ATP5G2P4-201ENST00000442175 420 ntBASIC13.63□□□□□ -0.23
CDH11P55287 RN7SL837P-201ENST00000463010 287 ntBASIC13.63□□□□□ -0.23
CDH11P55287 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
CDH11P55287 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CDH11P55287 AC004066.1-201ENST00000502488 802 ntBASIC13.63□□□□□ -0.23
CDH11P55287 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC13.63□□□□□ -0.23
CDH11P55287 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC13.63□□□□□ -0.23
CDH11P55287 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC13.63□□□□□ -0.23
CDH11P55287 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC13.63□□□□□ -0.23
CDH11P55287 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC13.63□□□□□ -0.23
CDH11P55287 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC13.63□□□□□ -0.23
CDH11P55287 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC13.63□□□□□ -0.23
CDH11P55287 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC13.63□□□□□ -0.23
CDH11P55287 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CDH11P55287 PIGL-212ENST00000581006 554 ntTSL 4 BASIC13.63□□□□□ -0.23
CDH11P55287 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC13.63□□□□□ -0.23
CDH11P55287 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC13.63□□□□□ -0.23
CDH11P55287 AL008721.1-201ENST00000609964 604 ntBASIC13.63□□□□□ -0.23
CDH11P55287 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC13.63□□□□□ -0.23
CDH11P55287 AL158212.4-201ENST00000624062 1286 ntBASIC13.63□□□□□ -0.23
CDH11P55287 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CDH11P55287 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CDH11P55287 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC13.63□□□□□ -0.23
CDH11P55287 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC13.63□□□□□ -0.23
CDH11P55287 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CDH11P55287 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CDH11P55287 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC13.63□□□□□ -0.23
CDH11P55287 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC13.63□□□□□ -0.23
CDH11P55287 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CDH11P55287 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CDH11P55287 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CDH11P55287 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC13.63□□□□□ -0.23
CDH11P55287 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
CDH11P55287 AC023090.2-201ENST00000625182 2110 ntBASIC13.63□□□□□ -0.23
CDH11P55287 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CDH11P55287 NOL9-201ENST00000377705 6649 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CDH11P55287 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CDH11P55287 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC13.63□□□□□ -0.23
CDH11P55287 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
CDH11P55287 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
CDH11P55287 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC13.62□□□□□ -0.23
CDH11P55287 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CDH11P55287 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
CDH11P55287 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CDH11P55287 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC13.62□□□□□ -0.23
CDH11P55287 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CDH11P55287 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CDH11P55287 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CDH11P55287 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CDH11P55287 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
CDH11P55287 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
CDH11P55287 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
CDH11P55287 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC13.62□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms