Protein–RNA interactions for Protein: P40925

MDH1, Malate dehydrogenase, cytoplasmic, humanhuman

Known RBP Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1P40925 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
MDH1P40925 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC14.88□□□□□ -0.03
MDH1P40925 TOMM22P5-201ENST00000416399 439 ntBASIC14.88□□□□□ -0.03
MDH1P40925 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC14.88□□□□□ -0.03
MDH1P40925 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
MDH1P40925 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
MDH1P40925 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC14.88□□□□□ -0.03
MDH1P40925 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC14.88□□□□□ -0.03
MDH1P40925 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
MDH1P40925 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC14.88□□□□□ -0.03
MDH1P40925 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC14.88□□□□□ -0.03
MDH1P40925 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC14.88□□□□□ -0.03
MDH1P40925 FAM86C2P-203ENST00000528684 1004 ntBASIC14.88□□□□□ -0.03
MDH1P40925 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
MDH1P40925 AC012313.10-201ENST00000623509 926 ntBASIC14.88□□□□□ -0.03
MDH1P40925 AC116407.3-201ENST00000623905 1129 ntBASIC14.88□□□□□ -0.03
MDH1P40925 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC14.88□□□□□ -0.03
MDH1P40925 GGA3-214ENST00000582717 2255 ntTSL 2 BASIC14.88□□□□□ -0.03
MDH1P40925 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC14.88□□□□□ -0.03
MDH1P40925 KIAA1683-201ENST00000392413 4402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
MDH1P40925 LCOR-203ENST00000371097 4852 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
MDH1P40925 SLC2A14-213ENST00000539924 1873 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
MDH1P40925 ITGB2-205ENST00000397850 3178 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
MDH1P40925 NPAS4-201ENST00000311034 3303 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
MDH1P40925 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
MDH1P40925 THEMIS2-201ENST00000328928 2337 ntTSL 2 BASIC14.88□□□□□ -0.03
MDH1P40925 BIRC5-202ENST00000350051 2630 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
MDH1P40925 TUBB8P4-201ENST00000511806 1324 ntBASIC14.88□□□□□ -0.03
MDH1P40925 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC14.88□□□□□ -0.03
MDH1P40925 TMEM41A-203ENST00000421852 2827 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
MDH1P40925 LRCH3-203ENST00000425562 2970 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
MDH1P40925 CTCFL-208ENST00000432255 2955 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
MDH1P40925 CYP51A1-AS1-201ENST00000453068 2957 ntTSL 5 BASIC14.88□□□□□ -0.03
MDH1P40925 PDHA1-212ENST00000540249 3277 ntTSL 2 BASIC14.88□□□□□ -0.03
MDH1P40925 TRIB1-201ENST00000311922 3635 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
MDH1P40925 DMTN-220ENST00000523266 2735 ntTSL 5 BASIC14.87□□□□□ -0.03
MDH1P40925 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
MDH1P40925 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
MDH1P40925 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
MDH1P40925 TUBGCP4-201ENST00000260383 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
MDH1P40925 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
MDH1P40925 PLEKHG2-206ENST00000458508 3898 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
MDH1P40925 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC14.87□□□□□ -0.03
MDH1P40925 ZNF821-214ENST00000565601 1858 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
MDH1P40925 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
MDH1P40925 ZNF778-202ENST00000433976 3608 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
MDH1P40925 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
MDH1P40925 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
MDH1P40925 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
MDH1P40925 CMC4-201ENST00000369479 864 ntAPPRIS P1 TSL 3 BASIC14.87□□□□□ -0.03
MDH1P40925 RPL13P2-201ENST00000440687 659 ntBASIC14.87□□□□□ -0.03
MDH1P40925 KRT18P2-201ENST00000447938 1258 ntBASIC14.87□□□□□ -0.03
MDH1P40925 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC14.87□□□□□ -0.03
MDH1P40925 KRT18P56-201ENST00000507275 550 ntBASIC14.87□□□□□ -0.03
MDH1P40925 AC079776.4-201ENST00000511039 504 ntBASIC14.87□□□□□ -0.03
MDH1P40925 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC14.87□□□□□ -0.03
MDH1P40925 IGHV3OR16-6-201ENST00000568775 360 ntBASIC14.87□□□□□ -0.03
MDH1P40925 RPS15-202ENST00000585665 467 ntTSL 3 BASIC14.87□□□□□ -0.03
MDH1P40925 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
MDH1P40925 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
MDH1P40925 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
MDH1P40925 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
MDH1P40925 NCSTN-201ENST00000294785 2936 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
MDH1P40925 COL16A1-202ENST00000373668 3643 ntTSL 2 BASIC14.87□□□□□ -0.03
MDH1P40925 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
MDH1P40925 KIZ-213ENST00000620891 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
MDH1P40925 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
MDH1P40925 MARK2P9-201ENST00000430958 1727 ntBASIC14.86□□□□□ -0.03
MDH1P40925 TMEM121B-202ENST00000399875 3961 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
MDH1P40925 AL022323.5-201ENST00000624101 2059 ntBASIC14.86□□□□□ -0.03
MDH1P40925 HNRNPLL-209ENST00000449105 4173 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
MDH1P40925 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC14.86□□□□□ -0.03
MDH1P40925 DYNC1I1-202ENST00000359388 2843 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
MDH1P40925 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
MDH1P40925 ZFAND3-201ENST00000287218 3366 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
MDH1P40925 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
MDH1P40925 SLC38A1-204ENST00000546893 2332 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
MDH1P40925 KRT33B-201ENST00000251646 1607 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
MDH1P40925 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
MDH1P40925 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
MDH1P40925 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC14.86□□□□□ -0.03
MDH1P40925 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
MDH1P40925 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
MDH1P40925 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC14.86□□□□□ -0.03
MDH1P40925 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
MDH1P40925 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC14.86□□□□□ -0.03
MDH1P40925 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC14.86□□□□□ -0.03
MDH1P40925 IGHV3-62-201ENST00000520057 340 ntBASIC14.86□□□□□ -0.03
MDH1P40925 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC14.86□□□□□ -0.03
MDH1P40925 IGHV3-22-201ENST00000520721 359 ntBASIC14.86□□□□□ -0.03
MDH1P40925 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
MDH1P40925 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC14.86□□□□□ -0.03
MDH1P40925 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC14.86□□□□□ -0.03
MDH1P40925 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC14.86□□□□□ -0.03
MDH1P40925 AL121912.1-201ENST00000603683 238 ntBASIC14.86□□□□□ -0.03
MDH1P40925 AC064836.3-201ENST00000607928 673 ntBASIC14.86□□□□□ -0.03
MDH1P40925 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC14.86□□□□□ -0.03
MDH1P40925 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
MDH1P40925 PRKAR2A-202ENST00000296446 3318 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
MDH1P40925 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms