Protein–RNA interactions for Protein: P06727

APOA4, Apolipoprotein A-IV, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA4P06727 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC14.88□□□□□ -0.03
APOA4P06727 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC14.88□□□□□ -0.03
APOA4P06727 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
APOA4P06727 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
APOA4P06727 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
APOA4P06727 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
APOA4P06727 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
APOA4P06727 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
APOA4P06727 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
APOA4P06727 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
APOA4P06727 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC14.88□□□□□ -0.03
APOA4P06727 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC14.88□□□□□ -0.03
APOA4P06727 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC14.88□□□□□ -0.03
APOA4P06727 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC14.88□□□□□ -0.03
APOA4P06727 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
APOA4P06727 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC14.88□□□□□ -0.03
APOA4P06727 TTTY23B-201ENST00000442790 549 ntBASIC14.88□□□□□ -0.03
APOA4P06727 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
APOA4P06727 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC14.88□□□□□ -0.03
APOA4P06727 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC14.88□□□□□ -0.03
APOA4P06727 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
APOA4P06727 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
APOA4P06727 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
APOA4P06727 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC14.88□□□□□ -0.03
APOA4P06727 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
APOA4P06727 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
APOA4P06727 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
APOA4P06727 RALGAPA1-201ENST00000307138 7911 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
APOA4P06727 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
APOA4P06727 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC14.88□□□□□ -0.03
APOA4P06727 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
APOA4P06727 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC14.88□□□□□ -0.03
APOA4P06727 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
APOA4P06727 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
APOA4P06727 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC14.88□□□□□ -0.03
APOA4P06727 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
APOA4P06727 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC14.87□□□□□ -0.03
APOA4P06727 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
APOA4P06727 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
APOA4P06727 MST1P2-201ENST00000457982 2291 ntBASIC14.87□□□□□ -0.03
APOA4P06727 PLIN4-201ENST00000301286 6353 ntAPPRIS P2 TSL 5 BASIC14.87□□□□□ -0.03
APOA4P06727 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
APOA4P06727 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
APOA4P06727 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
APOA4P06727 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
APOA4P06727 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC14.87□□□□□ -0.03
APOA4P06727 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
APOA4P06727 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
APOA4P06727 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC14.87□□□□□ -0.03
APOA4P06727 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC14.87□□□□□ -0.03
APOA4P06727 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC14.87□□□□□ -0.03
APOA4P06727 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
APOA4P06727 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
APOA4P06727 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
APOA4P06727 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
APOA4P06727 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
APOA4P06727 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
APOA4P06727 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
APOA4P06727 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC14.87□□□□□ -0.03
APOA4P06727 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
APOA4P06727 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
APOA4P06727 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
APOA4P06727 GRAP-202ENST00000395635 834 ntTSL 2 BASIC14.87□□□□□ -0.03
APOA4P06727 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC14.87□□□□□ -0.03
APOA4P06727 COX5BP8-201ENST00000416911 349 ntBASIC14.87□□□□□ -0.03
APOA4P06727 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC14.87□□□□□ -0.03
APOA4P06727 KRT17P7-201ENST00000451704 1104 ntBASIC14.87□□□□□ -0.03
APOA4P06727 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC14.87□□□□□ -0.03
APOA4P06727 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
APOA4P06727 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
APOA4P06727 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC14.87□□□□□ -0.03
APOA4P06727 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC14.87□□□□□ -0.03
APOA4P06727 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
APOA4P06727 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
APOA4P06727 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
APOA4P06727 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
APOA4P06727 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC14.87□□□□□ -0.03
APOA4P06727 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
APOA4P06727 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC14.87□□□□□ -0.03
APOA4P06727 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
APOA4P06727 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
APOA4P06727 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC14.87□□□□□ -0.03
APOA4P06727 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
APOA4P06727 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
APOA4P06727 AC104581.4-201ENST00000623126 3052 ntBASIC14.86□□□□□ -0.03
APOA4P06727 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
APOA4P06727 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
APOA4P06727 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
APOA4P06727 API5-203ENST00000455725 2257 ntTSL 2 BASIC14.86□□□□□ -0.03
APOA4P06727 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
APOA4P06727 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC14.86□□□□□ -0.03
APOA4P06727 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
APOA4P06727 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
APOA4P06727 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
APOA4P06727 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
APOA4P06727 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
APOA4P06727 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
APOA4P06727 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
APOA4P06727 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
APOA4P06727 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms