Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 AC093433.1-201ENST00000458048 571 ntBASIC14.05□□□□□ -0.16
SCN2BO60939 GCOM2-201ENST00000509133 1104 ntBASIC14.05□□□□□ -0.16
SCN2BO60939 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SCN2BO60939 AC103988.2-201ENST00000561804 725 ntBASIC14.05□□□□□ -0.16
SCN2BO60939 AP001063.1-201ENST00000568332 529 ntBASIC14.05□□□□□ -0.16
SCN2BO60939 CTBP2P3-201ENST00000585629 1255 ntBASIC14.05□□□□□ -0.16
SCN2BO60939 ATF5-205ENST00000600336 682 ntTSL 2 BASIC14.05□□□□□ -0.16
SCN2BO60939 METTL26-214ENST00000614890 801 ntTSL 3 BASIC14.05□□□□□ -0.16
SCN2BO60939 AP001002.3-201ENST00000623482 206 ntBASIC14.05□□□□□ -0.16
SCN2BO60939 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC14.05□□□□□ -0.16
SCN2BO60939 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC14.05□□□□□ -0.16
SCN2BO60939 NRXN1-207ENST00000404971 7578 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SCN2BO60939 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
SCN2BO60939 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SCN2BO60939 ARHGAP23P1-201ENST00000562773 1937 ntBASIC14.05□□□□□ -0.16
SCN2BO60939 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC14.05□□□□□ -0.16
SCN2BO60939 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
SCN2BO60939 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SCN2BO60939 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
SCN2BO60939 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SCN2BO60939 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SCN2BO60939 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
SCN2BO60939 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC14.05□□□□□ -0.16
SCN2BO60939 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC14.05□□□□□ -0.16
SCN2BO60939 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SCN2BO60939 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SCN2BO60939 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC14.04□□□□□ -0.16
SCN2BO60939 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SCN2BO60939 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SCN2BO60939 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
SCN2BO60939 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC14.04□□□□□ -0.16
SCN2BO60939 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
SCN2BO60939 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
SCN2BO60939 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC14.04□□□□□ -0.16
SCN2BO60939 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SCN2BO60939 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SCN2BO60939 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC14.04□□□□□ -0.16
SCN2BO60939 MBLAC2-202ENST00000514906 1936 ntBASIC14.04□□□□□ -0.16
SCN2BO60939 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SCN2BO60939 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
SCN2BO60939 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SCN2BO60939 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC14.04□□□□□ -0.16
SCN2BO60939 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC14.04□□□□□ -0.16
SCN2BO60939 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SCN2BO60939 MIR770-201ENST00000390219 98 ntBASIC14.04□□□□□ -0.16
SCN2BO60939 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SCN2BO60939 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC14.04□□□□□ -0.16
SCN2BO60939 AC087499.6-201ENST00000411576 835 ntBASIC14.04□□□□□ -0.16
SCN2BO60939 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC14.04□□□□□ -0.16
SCN2BO60939 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC14.04□□□□□ -0.16
SCN2BO60939 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC14.04□□□□□ -0.16
SCN2BO60939 VPS18-202ENST00000558474 873 ntTSL 3 BASIC14.04□□□□□ -0.16
SCN2BO60939 PAM16-204ENST00000571941 674 ntTSL 3 BASIC14.04□□□□□ -0.16
SCN2BO60939 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
SCN2BO60939 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC14.04□□□□□ -0.16
SCN2BO60939 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SCN2BO60939 AC138696.2-201ENST00000607376 223 ntBASIC14.04□□□□□ -0.16
SCN2BO60939 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SCN2BO60939 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
SCN2BO60939 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SCN2BO60939 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC14.04□□□□□ -0.16
SCN2BO60939 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SCN2BO60939 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SCN2BO60939 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
SCN2BO60939 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC14.04□□□□□ -0.16
SCN2BO60939 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC14.04□□□□□ -0.16
SCN2BO60939 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
SCN2BO60939 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
SCN2BO60939 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
SCN2BO60939 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
SCN2BO60939 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC14.04□□□□□ -0.16
SCN2BO60939 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC14.04□□□□□ -0.16
SCN2BO60939 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
SCN2BO60939 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
SCN2BO60939 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
SCN2BO60939 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SCN2BO60939 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SCN2BO60939 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC14.04□□□□□ -0.16
SCN2BO60939 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
SCN2BO60939 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
SCN2BO60939 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SCN2BO60939 SRC-202ENST00000373558 4304 ntTSL 5 BASIC14.04□□□□□ -0.16
SCN2BO60939 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
SCN2BO60939 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC14.03□□□□□ -0.16
SCN2BO60939 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
SCN2BO60939 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC14.03□□□□□ -0.16
SCN2BO60939 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
SCN2BO60939 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
SCN2BO60939 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
SCN2BO60939 TNN-203ENST00000622870 3719 ntTSL 5 BASIC14.03□□□□□ -0.16
SCN2BO60939 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
SCN2BO60939 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SCN2BO60939 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SCN2BO60939 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SCN2BO60939 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
SCN2BO60939 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC14.03□□□□□ -0.16
SCN2BO60939 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
SCN2BO60939 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC14.03□□□□□ -0.16
SCN2BO60939 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SCN2BO60939 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms