Protein–RNA interactions for Protein: Q9UIS9

MBD1, Methyl-CpG-binding domain protein 1, humanhuman

Predicted RBP Predictions only

Length 605 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1Q9UIS9 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
MBD1Q9UIS9 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
MBD1Q9UIS9 SERF2-209ENST00000409646 559 ntTSL 4 BASIC14.82□□□□□ -0.04
MBD1Q9UIS9 AL021707.5-201ENST00000420118 461 ntTSL 5 BASIC14.82□□□□□ -0.04
MBD1Q9UIS9 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
MBD1Q9UIS9 SMIM23-202ENST00000523047 573 ntAPPRIS P5 TSL 2 BASIC14.82□□□□□ -0.04
MBD1Q9UIS9 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
MBD1Q9UIS9 NPM1P43-201ENST00000558669 786 ntBASIC14.82□□□□□ -0.04
MBD1Q9UIS9 SAXO2-207ENST00000566861 404 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
MBD1Q9UIS9 SMIM22-209ENST00000591870 355 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
MBD1Q9UIS9 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
MBD1Q9UIS9 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC14.82□□□□□ -0.04
MBD1Q9UIS9 RN7SL736P-201ENST00000613111 269 ntBASIC14.82□□□□□ -0.04
MBD1Q9UIS9 COX6A1P2-201ENST00000620597 330 ntBASIC14.82□□□□□ -0.04
MBD1Q9UIS9 AL805961.1-201ENST00000642026 753 ntBASIC14.82□□□□□ -0.04
MBD1Q9UIS9 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
MBD1Q9UIS9 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
MBD1Q9UIS9 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
MBD1Q9UIS9 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC14.82□□□□□ -0.04
MBD1Q9UIS9 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC14.82□□□□□ -0.04
MBD1Q9UIS9 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC14.82□□□□□ -0.04
MBD1Q9UIS9 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
MBD1Q9UIS9 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
MBD1Q9UIS9 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
MBD1Q9UIS9 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
MBD1Q9UIS9 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
MBD1Q9UIS9 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
MBD1Q9UIS9 GPN3-201ENST00000228827 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
MBD1Q9UIS9 AC003102.2-201ENST00000589195 1469 ntBASIC14.82□□□□□ -0.04
MBD1Q9UIS9 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
MBD1Q9UIS9 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
MBD1Q9UIS9 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
MBD1Q9UIS9 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC14.81□□□□□ -0.04
MBD1Q9UIS9 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
MBD1Q9UIS9 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
MBD1Q9UIS9 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
MBD1Q9UIS9 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC14.81□□□□□ -0.04
MBD1Q9UIS9 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
MBD1Q9UIS9 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
MBD1Q9UIS9 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
MBD1Q9UIS9 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
MBD1Q9UIS9 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
MBD1Q9UIS9 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
MBD1Q9UIS9 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
MBD1Q9UIS9 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
MBD1Q9UIS9 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
MBD1Q9UIS9 LINC01101-201ENST00000622953 1884 ntBASIC14.81□□□□□ -0.04
MBD1Q9UIS9 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
MBD1Q9UIS9 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
MBD1Q9UIS9 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
MBD1Q9UIS9 AL627231.1-201ENST00000394467 1125 ntBASIC14.81□□□□□ -0.04
MBD1Q9UIS9 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC14.81□□□□□ -0.04
MBD1Q9UIS9 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC14.81□□□□□ -0.04
MBD1Q9UIS9 IDI2-AS1-201ENST00000420381 672 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
MBD1Q9UIS9 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC14.81□□□□□ -0.04
MBD1Q9UIS9 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
MBD1Q9UIS9 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC14.81□□□□□ -0.04
MBD1Q9UIS9 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC14.81□□□□□ -0.04
MBD1Q9UIS9 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC14.81□□□□□ -0.04
MBD1Q9UIS9 AC009884.2-201ENST00000603110 324 ntBASIC14.81□□□□□ -0.04
MBD1Q9UIS9 MIR6720-201ENST00000611664 98 ntBASIC14.81□□□□□ -0.04
MBD1Q9UIS9 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
MBD1Q9UIS9 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
MBD1Q9UIS9 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
MBD1Q9UIS9 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
MBD1Q9UIS9 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC14.81□□□□□ -0.04
MBD1Q9UIS9 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
MBD1Q9UIS9 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
MBD1Q9UIS9 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
MBD1Q9UIS9 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
MBD1Q9UIS9 KRT8P21-201ENST00000430398 1491 ntBASIC14.81□□□□□ -0.04
MBD1Q9UIS9 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC14.81□□□□□ -0.04
MBD1Q9UIS9 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
MBD1Q9UIS9 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
MBD1Q9UIS9 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
MBD1Q9UIS9 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
MBD1Q9UIS9 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
MBD1Q9UIS9 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
MBD1Q9UIS9 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
MBD1Q9UIS9 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
MBD1Q9UIS9 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
MBD1Q9UIS9 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
MBD1Q9UIS9 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
MBD1Q9UIS9 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC14.8□□□□□ -0.04
MBD1Q9UIS9 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC14.8□□□□□ -0.04
MBD1Q9UIS9 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
MBD1Q9UIS9 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
MBD1Q9UIS9 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
MBD1Q9UIS9 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
MBD1Q9UIS9 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
MBD1Q9UIS9 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC14.8□□□□□ -0.04
MBD1Q9UIS9 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
MBD1Q9UIS9 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
MBD1Q9UIS9 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
MBD1Q9UIS9 MRPS22-201ENST00000310776 1120 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
MBD1Q9UIS9 KDSR-201ENST00000326575 1024 ntTSL 2 BASIC14.8□□□□□ -0.04
MBD1Q9UIS9 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
MBD1Q9UIS9 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
MBD1Q9UIS9 PSMG4-203ENST00000380306 726 ntTSL 3 BASIC14.8□□□□□ -0.04
MBD1Q9UIS9 AC078875.1-201ENST00000431907 724 ntBASIC14.8□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms