Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC7.36□□□□□ -1.23
CDC42SE1Q9NRR8 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
CDC42SE1Q9NRR8 CLK3P2-201ENST00000427566 1453 ntBASIC7.36□□□□□ -1.23
CDC42SE1Q9NRR8 CYFIP1-207ENST00000617556 5674 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
CDC42SE1Q9NRR8 TRIM46-201ENST00000334634 3061 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
CDC42SE1Q9NRR8 PRDM1-201ENST00000369089 4675 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
CDC42SE1Q9NRR8 CACNG4-201ENST00000262138 3380 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
CDC42SE1Q9NRR8 FOSB-202ENST00000417353 3667 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
CDC42SE1Q9NRR8 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
CDC42SE1Q9NRR8 MUC4-203ENST00000346145 3982 ntAPPRIS P4 TSL 1 (best) BASIC7.35□□□□□ -1.23
CDC42SE1Q9NRR8 ZNF552-201ENST00000391701 2352 ntAPPRIS P1 TSL 2 BASIC7.35□□□□□ -1.23
CDC42SE1Q9NRR8 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC7.35□□□□□ -1.23
CDC42SE1Q9NRR8 CANT1-216ENST00000620915 3337 ntAPPRIS P1 TSL 5 BASIC7.35□□□□□ -1.23
CDC42SE1Q9NRR8 PLEKHA7-211ENST00000531066 4561 ntAPPRIS ALT2 TSL 5 BASIC7.35□□□□□ -1.23
CDC42SE1Q9NRR8 CPT1B-203ENST00000395650 2662 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
CDC42SE1Q9NRR8 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC7.35□□□□□ -1.23
CDC42SE1Q9NRR8 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC7.35□□□□□ -1.23
CDC42SE1Q9NRR8 CU633980.1-201ENST00000613894 1708 ntAPPRIS P1 BASIC7.35□□□□□ -1.23
CDC42SE1Q9NRR8 TFIP11-203ENST00000407431 2974 ntAPPRIS P1 TSL 2 BASIC7.35□□□□□ -1.23
CDC42SE1Q9NRR8 AGGF1-201ENST00000312916 4509 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
CDC42SE1Q9NRR8 RAB29-202ENST00000367139 3272 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
CDC42SE1Q9NRR8 SLC10A1-201ENST00000216540 2049 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
CDC42SE1Q9NRR8 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
CDC42SE1Q9NRR8 GRIK3-201ENST00000373091 9101 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
CDC42SE1Q9NRR8 AL031714.1-201ENST00000567829 2926 ntTSL 5 BASIC7.35□□□□□ -1.23
CDC42SE1Q9NRR8 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
CDC42SE1Q9NRR8 VCPIP1-201ENST00000310421 9942 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
CDC42SE1Q9NRR8 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC7.35□□□□□ -1.23
CDC42SE1Q9NRR8 POC5-213ENST00000514838 1984 ntTSL 5 BASIC7.35□□□□□ -1.23
CDC42SE1Q9NRR8 ATG7-202ENST00000354956 2296 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
CDC42SE1Q9NRR8 IGSF11-202ENST00000393775 3495 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
CDC42SE1Q9NRR8 BCAS3-202ENST00000407086 3496 ntAPPRIS P3 TSL 1 (best) BASIC7.35□□□□□ -1.23
CDC42SE1Q9NRR8 SLC2A4-201ENST00000317370 3426 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
CDC42SE1Q9NRR8 MATN2-218ENST00000524308 3449 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
CDC42SE1Q9NRR8 CYYR1-201ENST00000299340 3101 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
CDC42SE1Q9NRR8 RASGRF2-201ENST00000265080 8167 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
CDC42SE1Q9NRR8 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC7.35□□□□□ -1.23
CDC42SE1Q9NRR8 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC7.35□□□□□ -1.23
CDC42SE1Q9NRR8 INTS9-201ENST00000416984 2759 ntTSL 2 BASIC7.35□□□□□ -1.23
CDC42SE1Q9NRR8 GPT2-202ENST00000440783 4228 ntTSL 2 BASIC7.35□□□□□ -1.23
CDC42SE1Q9NRR8 SRP72-205ENST00000510663 2473 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
CDC42SE1Q9NRR8 ADGRE2-205ENST00000594076 2193 ntTSL 5 BASIC7.35□□□□□ -1.23
CDC42SE1Q9NRR8 TARS2-214ENST00000606933 2162 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
CDC42SE1Q9NRR8 PCDH20-201ENST00000409204 4778 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
CDC42SE1Q9NRR8 CAMTA2-208ENST00000572543 4496 ntAPPRIS ALT2 TSL 5 BASIC7.35□□□□□ -1.23
CDC42SE1Q9NRR8 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC7.35□□□□□ -1.23
CDC42SE1Q9NRR8 ZKSCAN1-205ENST00000535170 8758 ntTSL 2 BASIC7.35□□□□□ -1.23
CDC42SE1Q9NRR8 ALAS1-202ENST00000394965 2430 ntAPPRIS P1 TSL 2 BASIC7.35□□□□□ -1.23
CDC42SE1Q9NRR8 ANKRD13A-201ENST00000261739 4148 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
CDC42SE1Q9NRR8 MYH9-201ENST00000216181 7501 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
CDC42SE1Q9NRR8 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
CDC42SE1Q9NRR8 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
CDC42SE1Q9NRR8 BTG1-201ENST00000256015 4680 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
CDC42SE1Q9NRR8 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC7.35□□□□□ -1.23
CDC42SE1Q9NRR8 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC7.35□□□□□ -1.23
CDC42SE1Q9NRR8 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
CDC42SE1Q9NRR8 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
CDC42SE1Q9NRR8 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
CDC42SE1Q9NRR8 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
CDC42SE1Q9NRR8 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC7.35□□□□□ -1.23
CDC42SE1Q9NRR8 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
CDC42SE1Q9NRR8 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC7.35□□□□□ -1.23
CDC42SE1Q9NRR8 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC7.35□□□□□ -1.23
CDC42SE1Q9NRR8 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC7.35□□□□□ -1.23
CDC42SE1Q9NRR8 PMEL-201ENST00000449260 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC7.35□□□□□ -1.23
CDC42SE1Q9NRR8 AC245100.5-201ENST00000452108 331 ntBASIC7.35□□□□□ -1.23
CDC42SE1Q9NRR8 RNF146-205ENST00000477776 762 ntTSL 3 BASIC7.35□□□□□ -1.23
CDC42SE1Q9NRR8 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC7.35□□□□□ -1.23
CDC42SE1Q9NRR8 RERG-204ENST00000536465 2134 ntAPPRIS P1 TSL 3 BASIC7.35□□□□□ -1.23
CDC42SE1Q9NRR8 AC019129.2-201ENST00000609837 1235 ntBASIC7.35□□□□□ -1.23
CDC42SE1Q9NRR8 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
CDC42SE1Q9NRR8 RGS3-204ENST00000350696 4387 ntAPPRIS P1 TSL 5 BASIC7.35□□□□□ -1.23
CDC42SE1Q9NRR8 EPB41L1-203ENST00000373941 2652 ntAPPRIS ALT1 TSL 5 BASIC7.35□□□□□ -1.23
CDC42SE1Q9NRR8 AL359317.2-201ENST00000554898 1826 ntTSL 2 BASIC7.35□□□□□ -1.23
CDC42SE1Q9NRR8 CSNK1G3-201ENST00000345990 4635 ntAPPRIS ALT2 TSL 1 (best) BASIC7.35□□□□□ -1.23
CDC42SE1Q9NRR8 TCOF1-211ENST00000513346 4646 ntAPPRIS ALT2 TSL 5 BASIC7.35□□□□□ -1.23
CDC42SE1Q9NRR8 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC7.35□□□□□ -1.23
CDC42SE1Q9NRR8 LINC00342-202ENST00000448494 2351 ntTSL 2 BASIC7.35□□□□□ -1.23
CDC42SE1Q9NRR8 UBE2L3-204ENST00000545681 2932 ntTSL 2 BASIC7.35□□□□□ -1.23
CDC42SE1Q9NRR8 FAM160A1-201ENST00000435205 4576 ntAPPRIS P1 TSL 5 BASIC7.35□□□□□ -1.23
CDC42SE1Q9NRR8 LAMA3-203ENST00000399516 9834 ntAPPRIS ALT2 TSL 1 (best) BASIC7.35□□□□□ -1.23
CDC42SE1Q9NRR8 EIF4E3-205ENST00000448225 6209 ntTSL 5 BASIC7.35□□□□□ -1.23
CDC42SE1Q9NRR8 STRA6-201ENST00000323940 2864 ntAPPRIS P1 TSL 2 BASIC7.35□□□□□ -1.23
CDC42SE1Q9NRR8 DMBX1-202ENST00000371956 2882 ntAPPRIS ALT1 TSL 1 (best) BASIC7.35□□□□□ -1.23
CDC42SE1Q9NRR8 ZNF221-204ENST00000592350 2329 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
CDC42SE1Q9NRR8 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC7.35□□□□□ -1.23
CDC42SE1Q9NRR8 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC7.35□□□□□ -1.23
CDC42SE1Q9NRR8 PAK5-203ENST00000378429 4780 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
CDC42SE1Q9NRR8 AL772337.1-201ENST00000399186 2014 ntTSL 5 BASIC7.35□□□□□ -1.23
CDC42SE1Q9NRR8 AL356753.1-201ENST00000427035 2018 ntTSL 2 BASIC7.35□□□□□ -1.23
CDC42SE1Q9NRR8 G3BP1-201ENST00000356245 2803 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
CDC42SE1Q9NRR8 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
CDC42SE1Q9NRR8 IRF5-208ENST00000473745 2282 ntAPPRIS P1 TSL 5 BASIC7.35□□□□□ -1.23
CDC42SE1Q9NRR8 ANKRD27-204ENST00000587352 3301 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
CDC42SE1Q9NRR8 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC7.35□□□□□ -1.23
CDC42SE1Q9NRR8 MSNP1-201ENST00000511640 1732 ntBASIC7.35□□□□□ -1.23
CDC42SE1Q9NRR8 MAMLD1-201ENST00000262858 4607 ntAPPRIS P3 TSL 5 BASIC7.35□□□□□ -1.23
CDC42SE1Q9NRR8 KCNA10-201ENST00000369771 1959 ntAPPRIS P1 BASIC7.35□□□□□ -1.23
CDC42SE1Q9NRR8 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
CDC42SE1Q9NRR8 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms