RNA–Protein interactions for RNA: ENST00000391701.1

ZNF552-201, Transcript of zinc finger protein 552, humanhuman

APPRIS P1 TSL 2 BASIC

Gene ZNF552, Length 2,352 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF552-201ENST00000391701 NISCHQ9Y2I1 1504 aa23.89■■□□□ 1.42
ZNF552-201ENST00000391701 ZCCHC6Q5VYS8 1495 aaKnown RBP20.3■□□□□ 0.84
ZNF552-201ENST00000391701 CCDC180Q9P1Z9 1646 aa20.3■□□□□ 0.84
ZNF552-201ENST00000391701 SHROOM4Q9ULL8 1493 aa20.23■□□□□ 0.83
ZNF552-201ENST00000391701 SUPT5HO00267 1087 aaKnown RBP20.1■□□□□ 0.81
ZNF552-201ENST00000391701 HRCP23327 699 aa19.99■□□□□ 0.79
ZNF552-201ENST00000391701 CHIC1Q5VXU3 224 aa19.9■□□□□ 0.78
ZNF552-201ENST00000391701 DCAF1Q9Y4B6 1507 aa19.82■□□□□ 0.76
ZNF552-201ENST00000391701 MYO15BQ96JP2 1530 aa19.77■□□□□ 0.75
ZNF552-201ENST00000391701 PCGF6Q9BYE7 350 aa19.55■□□□□ 0.72
ZNF552-201ENST00000391701 DCAF8L2P0C7V8 631 aa19.33■□□□□ 0.69
ZNF552-201ENST00000391701 TRIM26Q12899 539 aaPredicted RBP19.33■□□□□ 0.68
ZNF552-201ENST00000391701 ZEB1P37275 1124 aaPredicted RBP19.27■□□□□ 0.68
ZNF552-201ENST00000391701 ABCC9O60706 1549 aa19.22■□□□□ 0.67
ZNF552-201ENST00000391701 PPARGC1BQ86YN6 1023 aaKnown RBP19.17■□□□□ 0.66
ZNF552-201ENST00000391701 LOC105371045A0A1W2PR82 267 aa19.13■□□□□ 0.65
ZNF552-201ENST00000391701 PELP1Q8IZL8 1130 aaKnown RBP19.09■□□□□ 0.65
ZNF552-201ENST00000391701 RSF1Q96T23 1441 aaPredicted RBP18.98■□□□□ 0.63
ZNF552-201ENST00000391701 RB1CC1Q8TDY2 1594 aa18.95■□□□□ 0.62
ZNF552-201ENST00000391701 TRIM41Q8WV44 630 aa18.88■□□□□ 0.61
ZNF552-201ENST00000391701 SCRIBQ14160 1630 aa18.77■□□□□ 0.59
ZNF552-201ENST00000391701 NACADO15069 1562 aa18.66■□□□□ 0.58
ZNF552-201ENST00000391701 SCAF1Q9H7N4 1312 aaKnown RBP18.51■□□□□ 0.55
ZNF552-201ENST00000391701 FAM9AQ8IZU1 332 aaPredicted RBP18.48■□□□□ 0.55
ZNF552-201ENST00000391701 MROH2BQ7Z745 1585 aa18.46■□□□□ 0.55
ZNF552-201ENST00000391701 BAZ1AQ9NRL2 1556 aaPredicted RBP18.46■□□□□ 0.55
ZNF552-201ENST00000391701 WRNQ14191 1432 aaPredicted RBP eCLIP18.43■□□□□ 0.54
ZNF552-201ENST00000391701 CECR2Q9BXF3 1484 aa18.42■□□□□ 0.54
ZNF552-201ENST00000391701 EIF4G1Q04637 1599 aaKnown RBP18.41■□□□□ 0.54
ZNF552-201ENST00000391701 MYT1Q01538 1121 aa18.39■□□□□ 0.53
ZNF552-201ENST00000391701 WIZO95785 1651 aa18.37■□□□□ 0.53
ZNF552-201ENST00000391701 ACIN1Q9UKV3 1341 aaKnown RBP18.36■□□□□ 0.53
ZNF552-201ENST00000391701 CENPBP07199 599 aaPredicted RBP18.34■□□□□ 0.53
ZNF552-201ENST00000391701 CCER1Q8TC90 406 aaPredicted RBP18.34■□□□□ 0.53
ZNF552-201ENST00000391701 EEA1Q15075 1411 aa18.3■□□□□ 0.52
ZNF552-201ENST00000391701 TOP2AP11388 1531 aaKnown RBP18.25■□□□□ 0.51
ZNF552-201ENST00000391701 TNIKQ9UKE5 1360 aa18.22■□□□□ 0.51
ZNF552-201ENST00000391701 DIEXFQ68CQ4 756 aaKnown RBP18.22■□□□□ 0.51
ZNF552-201ENST00000391701 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.22■□□□□ 0.51
ZNF552-201ENST00000391701 CEP162Q5TB80 1403 aa18.17■□□□□ 0.5
ZNF552-201ENST00000391701 NEUROD1Q13562 356 aa18.16■□□□□ 0.5
ZNF552-201ENST00000391701 EHMT2Q96KQ7 1210 aa18.11■□□□□ 0.49
ZNF552-201ENST00000391701 SMARCA4P51532 1647 aa18.1■□□□□ 0.49
ZNF552-201ENST00000391701 SMARCA2P51531 1590 aa18.1■□□□□ 0.49
ZNF552-201ENST00000391701 CCDC88BA6NC98 1476 aa18.08■□□□□ 0.48
ZNF552-201ENST00000391701 ZNF316A6NFI3 1004 aaPredicted RBP18.05■□□□□ 0.48
ZNF552-201ENST00000391701 GTF3C3Q9Y5Q9 886 aa18.05■□□□□ 0.48
ZNF552-201ENST00000391701 GOLGA3Q08378 1498 aa18.03■□□□□ 0.48
ZNF552-201ENST00000391701 CSRNP3Q8WYN3 585 aa18.03■□□□□ 0.48
ZNF552-201ENST00000391701 ABCC8Q09428 1581 aa18.02■□□□□ 0.48
ZNF552-201ENST00000391701 SOGA1O94964 1423 aa17.95■□□□□ 0.46
ZNF552-201ENST00000391701 KIF21BO75037 1637 aa17.93■□□□□ 0.46
ZNF552-201ENST00000391701 CEP164Q9UPV0 1460 aa17.92■□□□□ 0.46
ZNF552-201ENST00000391701 UBTFP17480 764 aaKnown RBP17.89■□□□□ 0.45
ZNF552-201ENST00000391701 BAZ1BQ9UIG0 1483 aaKnown RBP17.88■□□□□ 0.45
ZNF552-201ENST00000391701 PEG3Q9GZU2 1588 aa17.87■□□□□ 0.45
ZNF552-201ENST00000391701 CLSPNQ9HAW4 1339 aa17.86■□□□□ 0.45
ZNF552-201ENST00000391701 UNC13AQ9UPW8 1703 aa17.8■□□□□ 0.44
ZNF552-201ENST00000391701 VPS8Q8N3P4 1428 aa17.8■□□□□ 0.44
ZNF552-201ENST00000391701 RUSC2Q8N2Y8 1516 aa17.78■□□□□ 0.44
ZNF552-201ENST00000391701 CLIP1P30622 1438 aa17.77■□□□□ 0.44
ZNF552-201ENST00000391701 APLP2Q06481 763 aa17.73■□□□□ 0.43
ZNF552-201ENST00000391701 TTBK1Q5TCY1 1321 aaPredicted RBP17.69■□□□□ 0.42
ZNF552-201ENST00000391701 MIER1Q8N108 512 aa17.68■□□□□ 0.42
ZNF552-201ENST00000391701 SYNJ1O43426 1573 aa17.67■□□□□ 0.42
ZNF552-201ENST00000391701 HNRNPUL2Q1KMD3 747 aaKnown RBP17.61■□□□□ 0.41
ZNF552-201ENST00000391701 ERICH3Q5RHP9 1530 aa17.61■□□□□ 0.41
ZNF552-201ENST00000391701 YTHDC1Q96MU7 727 aaKnown RBP17.58■□□□□ 0.41
ZNF552-201ENST00000391701 BICRAQ9NZM4 1560 aa17.57■□□□□ 0.4
ZNF552-201ENST00000391701 TOP2BQ02880 1626 aa17.56■□□□□ 0.4
ZNF552-201ENST00000391701 RAPGEF2Q9Y4G8 1499 aa17.55■□□□□ 0.4
ZNF552-201ENST00000391701 ATAD2BQ9ULI0 1458 aa17.53■□□□□ 0.4
ZNF552-201ENST00000391701 BIVM-ERCC5R4GMW8 1640 aa17.51■□□□□ 0.39
ZNF552-201ENST00000391701 CUX2O14529 1486 aa17.51■□□□□ 0.39
ZNF552-201ENST00000391701 DHX57Q6P158 1386 aaKnown RBP17.5■□□□□ 0.39
ZNF552-201ENST00000391701 PRXQ9BXM0 1461 aa17.48■□□□□ 0.39
ZNF552-201ENST00000391701 RRBP1Q9P2E9 1410 aaKnown RBP17.47■□□□□ 0.39
ZNF552-201ENST00000391701 ARAP1Q96P48 1450 aa17.4■□□□□ 0.38
ZNF552-201ENST00000391701 SUPT16HQ9Y5B9 1047 aaKnown RBP17.36■□□□□ 0.37
ZNF552-201ENST00000391701 MAP3K1Q13233 1512 aa17.35■□□□□ 0.37
ZNF552-201ENST00000391701 KIF27Q86VH2 1401 aa17.33■□□□□ 0.36
ZNF552-201ENST00000391701 CCNB3Q8WWL7 1395 aa17.32■□□□□ 0.36
ZNF552-201ENST00000391701 PABPN1Q86U42 306 aaKnown RBP eCLIP17.29■□□□□ 0.36
ZNF552-201ENST00000391701 HMGXB3Q12766 1538 aa17.28■□□□□ 0.36
ZNF552-201ENST00000391701 TIMELESSQ9UNS1 1208 aa17.26■□□□□ 0.35
ZNF552-201ENST00000391701 KANK4Q5T7N3 995 aaPredicted RBP17.23■□□□□ 0.35
ZNF552-201ENST00000391701 NCAPD3P42695 1498 aa17.21■□□□□ 0.35
ZNF552-201ENST00000391701 ARHGAP35Q9NRY4 1499 aa17.2■□□□□ 0.34
ZNF552-201ENST00000391701 CUX1P39880 1505 aa17.19■□□□□ 0.34
ZNF552-201ENST00000391701 TSHZ2Q9NRE2 1034 aa17.16■□□□□ 0.34
ZNF552-201ENST00000391701 TIAM1Q13009 1591 aa17.15■□□□□ 0.34
ZNF552-201ENST00000391701 SETD5Q9C0A6 1442 aa17.15■□□□□ 0.34
ZNF552-201ENST00000391701 CFTRP13569 1480 aa17.14■□□□□ 0.33
ZNF552-201ENST00000391701 MAPKBP1O60336 1514 aa17.14■□□□□ 0.33
ZNF552-201ENST00000391701 RAB3GAP2Q9H2M9 1393 aa17.14■□□□□ 0.33
ZNF552-201ENST00000391701 RANGAP1P46060 587 aaPredicted RBP17.14■□□□□ 0.33
ZNF552-201ENST00000391701 ANP32EQ9BTT0 268 aa17.13■□□□□ 0.33
ZNF552-201ENST00000391701 PRDM2Q13029 1718 aa17.11■□□□□ 0.33
ZNF552-201ENST00000391701 FHAD1B1AJZ9 1412 aa17.1■□□□□ 0.33
ZNF552-201ENST00000391701 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms