RNA–Protein interactions for RNA: ENST00000572543.5

CAMTA2-208, Transcript of calmodulin binding transcription activator 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CAMTA2, Length 4,496 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAMTA2-208ENST00000572543 NISCHQ9Y2I1 1504 aa21.24■□□□□ 0.99
CAMTA2-208ENST00000572543 SUPT5HO00267 1087 aaKnown RBP19.58■□□□□ 0.72
CAMTA2-208ENST00000572543 DCAF8L2P0C7V8 631 aa19.51■□□□□ 0.71
CAMTA2-208ENST00000572543 SHROOM4Q9ULL8 1493 aa19.42■□□□□ 0.7
CAMTA2-208ENST00000572543 PCGF6Q9BYE7 350 aa18.82■□□□□ 0.6
CAMTA2-208ENST00000572543 HRCP23327 699 aa18.63■□□□□ 0.57
CAMTA2-208ENST00000572543 ZEB1P37275 1124 aaPredicted RBP18.48■□□□□ 0.55
CAMTA2-208ENST00000572543 CHIC1Q5VXU3 224 aa18.42■□□□□ 0.54
CAMTA2-208ENST00000572543 PELP1Q8IZL8 1130 aaKnown RBP18.35■□□□□ 0.53
CAMTA2-208ENST00000572543 EHMT2Q96KQ7 1210 aa18.3■□□□□ 0.52
CAMTA2-208ENST00000572543 TRIM26Q12899 539 aaPredicted RBP18.26■□□□□ 0.51
CAMTA2-208ENST00000572543 FAM9AQ8IZU1 332 aaPredicted RBP18.24■□□□□ 0.51
CAMTA2-208ENST00000572543 TRIM41Q8WV44 630 aa18.21■□□□□ 0.51
CAMTA2-208ENST00000572543 PPARGC1BQ86YN6 1023 aaKnown RBP18.09■□□□□ 0.49
CAMTA2-208ENST00000572543 LOC105371045A0A1W2PR82 267 aa18.07■□□□□ 0.48
CAMTA2-208ENST00000572543 CENPBP07199 599 aaPredicted RBP18.06■□□□□ 0.48
CAMTA2-208ENST00000572543 CCER1Q8TC90 406 aaPredicted RBP17.99■□□□□ 0.47
CAMTA2-208ENST00000572543 ZCCHC6Q5VYS8 1495 aaKnown RBP17.85■□□□□ 0.45
CAMTA2-208ENST00000572543 APLP2Q06481 763 aa17.84■□□□□ 0.45
CAMTA2-208ENST00000572543 MYT1Q01538 1121 aa17.84■□□□□ 0.45
CAMTA2-208ENST00000572543 TTBK1Q5TCY1 1321 aaPredicted RBP17.8■□□□□ 0.44
CAMTA2-208ENST00000572543 DCAF1Q9Y4B6 1507 aa17.77■□□□□ 0.44
CAMTA2-208ENST00000572543 MYO15BQ96JP2 1530 aa17.63■□□□□ 0.41
CAMTA2-208ENST00000572543 UBTFP17480 764 aaKnown RBP17.61■□□□□ 0.41
CAMTA2-208ENST00000572543 CCDC180Q9P1Z9 1646 aa17.56■□□□□ 0.4
CAMTA2-208ENST00000572543 YTHDC1Q96MU7 727 aaKnown RBP17.51■□□□□ 0.39
CAMTA2-208ENST00000572543 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.49■□□□□ 0.39
CAMTA2-208ENST00000572543 DIEXFQ68CQ4 756 aaKnown RBP17.47■□□□□ 0.39
CAMTA2-208ENST00000572543 RANGAP1P46060 587 aaPredicted RBP17.34■□□□□ 0.37
CAMTA2-208ENST00000572543 ACIN1Q9UKV3 1341 aaKnown RBP17.32■□□□□ 0.36
CAMTA2-208ENST00000572543 GTF3C3Q9Y5Q9 886 aa17.3■□□□□ 0.36
CAMTA2-208ENST00000572543 HNRNPUL2Q1KMD3 747 aaKnown RBP17.23■□□□□ 0.35
CAMTA2-208ENST00000572543 SCAF1Q9H7N4 1312 aaKnown RBP17.17■□□□□ 0.34
CAMTA2-208ENST00000572543 ZNF316A6NFI3 1004 aaPredicted RBP17.17■□□□□ 0.34
CAMTA2-208ENST00000572543 NEFLP07196 543 aa17.16■□□□□ 0.34
CAMTA2-208ENST00000572543 ABCC9O60706 1549 aa17.09■□□□□ 0.33
CAMTA2-208ENST00000572543 SCRIBQ14160 1630 aa17.09■□□□□ 0.33
CAMTA2-208ENST00000572543 ERICH6Q7L0X2 663 aa17.08■□□□□ 0.32
CAMTA2-208ENST00000572543 RSF1Q96T23 1441 aaPredicted RBP17.05■□□□□ 0.32
CAMTA2-208ENST00000572543 NEUROD1Q13562 356 aa17.04■□□□□ 0.32
CAMTA2-208ENST00000572543 CSRNP3Q8WYN3 585 aa16.99■□□□□ 0.31
CAMTA2-208ENST00000572543 ATP1B4Q9UN42 357 aaPredicted RBP16.95■□□□□ 0.3
CAMTA2-208ENST00000572543 ITGAEP38570 1179 aa16.91■□□□□ 0.3
CAMTA2-208ENST00000572543 RB1CC1Q8TDY2 1594 aa16.86■□□□□ 0.29
CAMTA2-208ENST00000572543 CLSPNQ9HAW4 1339 aa16.86■□□□□ 0.29
CAMTA2-208ENST00000572543 EEA1Q15075 1411 aa16.73■□□□□ 0.27
CAMTA2-208ENST00000572543 CEP162Q5TB80 1403 aa16.73■□□□□ 0.27
CAMTA2-208ENST00000572543 MIER1Q8N108 512 aa16.69■□□□□ 0.26
CAMTA2-208ENST00000572543 TNIKQ9UKE5 1360 aa16.67■□□□□ 0.26
CAMTA2-208ENST00000572543 PABPN1Q86U42 306 aaKnown RBP eCLIP16.65■□□□□ 0.26
CAMTA2-208ENST00000572543 GOLGA3Q08378 1498 aa16.62■□□□□ 0.25
CAMTA2-208ENST00000572543 BCANQ96GW7 911 aa16.62■□□□□ 0.25
CAMTA2-208ENST00000572543 NACADO15069 1562 aa16.61■□□□□ 0.25
CAMTA2-208ENST00000572543 FAM50AQ14320 339 aaKnown RBP16.61■□□□□ 0.25
CAMTA2-208ENST00000572543 ANP32CO43423 234 aa16.59■□□□□ 0.25
CAMTA2-208ENST00000572543 CLIP1P30622 1438 aa16.59■□□□□ 0.25
CAMTA2-208ENST00000572543 CECR2Q9BXF3 1484 aa16.56■□□□□ 0.24
CAMTA2-208ENST00000572543 BAZ1AQ9NRL2 1556 aaPredicted RBP16.51■□□□□ 0.23
CAMTA2-208ENST00000572543 MROH2BQ7Z745 1585 aa16.47■□□□□ 0.23
CAMTA2-208ENST00000572543 CEP164Q9UPV0 1460 aa16.46■□□□□ 0.23
CAMTA2-208ENST00000572543 CDK11AQ9UQ88 783 aaPredicted RBP16.46■□□□□ 0.23
CAMTA2-208ENST00000572543 WRNQ14191 1432 aaPredicted RBP eCLIP16.45■□□□□ 0.22
CAMTA2-208ENST00000572543 FKBP8Q14318 412 aa16.44■□□□□ 0.22
CAMTA2-208ENST00000572543 SOGA1O94964 1423 aa16.4■□□□□ 0.22
CAMTA2-208ENST00000572543 DDX10Q13206 875 aaKnown RBP16.37■□□□□ 0.21
CAMTA2-208ENST00000572543 POLR3GLQ9BT43 218 aa16.35■□□□□ 0.21
CAMTA2-208ENST00000572543 CCDC88BA6NC98 1476 aa16.34■□□□□ 0.21
CAMTA2-208ENST00000572543 RTL5Q5HYW3 569 aaPredicted RBP16.32■□□□□ 0.2
CAMTA2-208ENST00000572543 TRIM52Q96A61 297 aa16.32■□□□□ 0.2
CAMTA2-208ENST00000572543 ABCC8Q09428 1581 aa16.31■□□□□ 0.2
CAMTA2-208ENST00000572543 WIZO95785 1651 aa16.3■□□□□ 0.2
CAMTA2-208ENST00000572543 SUPT16HQ9Y5B9 1047 aaKnown RBP16.29■□□□□ 0.2
CAMTA2-208ENST00000572543 VPS8Q8N3P4 1428 aa16.29■□□□□ 0.2
CAMTA2-208ENST00000572543 TONSLQ96HA7 1378 aa16.29■□□□□ 0.2
CAMTA2-208ENST00000572543 ANP32EQ9BTT0 268 aa16.26■□□□□ 0.19
CAMTA2-208ENST00000572543 P3H3Q8IVL6 736 aa16.24■□□□□ 0.19
CAMTA2-208ENST00000572543 DAXXQ9UER7 740 aaPredicted RBP16.24■□□□□ 0.19
CAMTA2-208ENST00000572543 CNGB1Q14028 1251 aaPredicted RBP16.23■□□□□ 0.19
CAMTA2-208ENST00000572543 TOP2AP11388 1531 aaKnown RBP16.23■□□□□ 0.19
CAMTA2-208ENST00000572543 HNRNPUQ00839 825 aaKnown RBP eCLIP16.21■□□□□ 0.19
CAMTA2-208ENST00000572543 MYT1LQ9UL68 1186 aa16.18■□□□□ 0.18
CAMTA2-208ENST00000572543 BAZ1BQ9UIG0 1483 aaKnown RBP16.15■□□□□ 0.18
CAMTA2-208ENST00000572543 CCNB3Q8WWL7 1395 aa16.14■□□□□ 0.17
CAMTA2-208ENST00000572543 KIF27Q86VH2 1401 aa16.13■□□□□ 0.17
CAMTA2-208ENST00000572543 ANP32AP39687 249 aaKnown RBP16.1■□□□□ 0.17
CAMTA2-208ENST00000572543 HIRIP3Q9BW71 556 aaPredicted RBP16.07■□□□□ 0.16
CAMTA2-208ENST00000572543 TIMELESSQ9UNS1 1208 aa16.07■□□□□ 0.16
CAMTA2-208ENST00000572543 RUSC2Q8N2Y8 1516 aa16.04■□□□□ 0.16
CAMTA2-208ENST00000572543 FAM9BQ8IZU0 186 aa16.02■□□□□ 0.16
CAMTA2-208ENST00000572543 ZNF326Q5BKZ1 582 aaKnown RBP16.02■□□□□ 0.16
CAMTA2-208ENST00000572543 TSHZ2Q9NRE2 1034 aa16.02■□□□□ 0.16
CAMTA2-208ENST00000572543 CCER2I3L3R5 266 aa16.02■□□□□ 0.15
CAMTA2-208ENST00000572543 MTUS2Q5JR59 1369 aa16.01■□□□□ 0.15
CAMTA2-208ENST00000572543 KANK4Q5T7N3 995 aaPredicted RBP16.01■□□□□ 0.15
CAMTA2-208ENST00000572543 SMARCA4P51532 1647 aa16.01■□□□□ 0.15
CAMTA2-208ENST00000572543 DHX57Q6P158 1386 aaKnown RBP16.01■□□□□ 0.15
CAMTA2-208ENST00000572543 SIN3AQ96ST3 1273 aa16.01■□□□□ 0.15
CAMTA2-208ENST00000572543 MRS2Q9HD23 443 aa15.98■□□□□ 0.15
CAMTA2-208ENST00000572543 SETD5Q9C0A6 1442 aa15.98■□□□□ 0.15
CAMTA2-208ENST00000572543 EIF4G2P78344 907 aaKnown RBP eCLIP15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms