RNA–Protein interactions for RNA: ENST00000369089.3

PRDM1-201, Transcript of PR/SET domain 1, humanhuman

TSL 1 (best) BASIC

Gene PRDM1, Length 4,675 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM1-201ENST00000369089 PELP1Q8IZL8 1130 aaKnown RBP18.25■□□□□ 0.51
PRDM1-201ENST00000369089 MYT1Q01538 1121 aa18.16■□□□□ 0.5
PRDM1-201ENST00000369089 NISCHQ9Y2I1 1504 aa17.39■□□□□ 0.37
PRDM1-201ENST00000369089 TTBK1Q5TCY1 1321 aaPredicted RBP16.95■□□□□ 0.3
PRDM1-201ENST00000369089 DCAF8L2P0C7V8 631 aa16.93■□□□□ 0.3
PRDM1-201ENST00000369089 HRCP23327 699 aa16.57■□□□□ 0.24
PRDM1-201ENST00000369089 CENPBP07199 599 aaPredicted RBP16.53■□□□□ 0.24
PRDM1-201ENST00000369089 ERICH6Q7L0X2 663 aa16.52■□□□□ 0.23
PRDM1-201ENST00000369089 PCGF6Q9BYE7 350 aa16.38■□□□□ 0.21
PRDM1-201ENST00000369089 ZEB1P37275 1124 aaPredicted RBP16.26■□□□□ 0.19
PRDM1-201ENST00000369089 SUPT5HO00267 1087 aaKnown RBP16.18■□□□□ 0.18
PRDM1-201ENST00000369089 SHROOM4Q9ULL8 1493 aa16.11■□□□□ 0.17
PRDM1-201ENST00000369089 PPARGC1BQ86YN6 1023 aaKnown RBP16.03■□□□□ 0.16
PRDM1-201ENST00000369089 CCER1Q8TC90 406 aaPredicted RBP15.93■□□□□ 0.14
PRDM1-201ENST00000369089 GTF3C3Q9Y5Q9 886 aa15.83■□□□□ 0.12
PRDM1-201ENST00000369089 BCL11AQ9H165 835 aa15.81■□□□□ 0.12
PRDM1-201ENST00000369089 SCAF1Q9H7N4 1312 aaKnown RBP15.81■□□□□ 0.12
PRDM1-201ENST00000369089 ACIN1Q9UKV3 1341 aaKnown RBP15.74■□□□□ 0.11
PRDM1-201ENST00000369089 YTHDC1Q96MU7 727 aaKnown RBP15.7■□□□□ 0.1
PRDM1-201ENST00000369089 TRIM26Q12899 539 aaPredicted RBP15.55■□□□□ 0.08
PRDM1-201ENST00000369089 PRKCSHP14314 528 aaPredicted RBP15.49■□□□□ 0.07
PRDM1-201ENST00000369089 NEFLP07196 543 aa15.48■□□□□ 0.07
PRDM1-201ENST00000369089 ANP32EQ9BTT0 268 aa15.45■□□□□ 0.06
PRDM1-201ENST00000369089 DIEXFQ68CQ4 756 aaKnown RBP15.37■□□□□ 0.05
PRDM1-201ENST00000369089 NEUROD1Q13562 356 aa15.35■□□□□ 0.05
PRDM1-201ENST00000369089 EHMT2Q96KQ7 1210 aa15.35■□□□□ 0.05
PRDM1-201ENST00000369089 MYT1LQ9UL68 1186 aa15.33■□□□□ 0.04
PRDM1-201ENST00000369089 RTL5Q5HYW3 569 aaPredicted RBP15.31■□□□□ 0.04
PRDM1-201ENST00000369089 GLIPR1L2Q4G1C9 344 aa15.27■□□□□ 0.04
PRDM1-201ENST00000369089 SLC24A1O60721 1099 aa15.26■□□□□ 0.03
PRDM1-201ENST00000369089 FAM9AQ8IZU1 332 aaPredicted RBP15.22■□□□□ 0.03
PRDM1-201ENST00000369089 EIF5BO60841 1220 aaKnown RBP15.22■□□□□ 0.03
PRDM1-201ENST00000369089 CLSPNQ9HAW4 1339 aa15.16■□□□□ 0.02
PRDM1-201ENST00000369089 TRIM41Q8WV44 630 aa15.02■□□□□ -0
PRDM1-201ENST00000369089 CSRNP3Q8WYN3 585 aa14.98□□□□□ -0.01
PRDM1-201ENST00000369089 BCANQ96GW7 911 aa14.94□□□□□ -0.02
PRDM1-201ENST00000369089 APLP2Q06481 763 aa14.92□□□□□ -0.02
PRDM1-201ENST00000369089 CDK11AQ9UQ88 783 aaPredicted RBP14.89□□□□□ -0.03
PRDM1-201ENST00000369089 DAXXQ9UER7 740 aaPredicted RBP14.84□□□□□ -0.03
PRDM1-201ENST00000369089 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.8□□□□□ -0.04
PRDM1-201ENST00000369089 ZNF316A6NFI3 1004 aaPredicted RBP14.8□□□□□ -0.04
PRDM1-201ENST00000369089 CHIC1Q5VXU3 224 aa14.8□□□□□ -0.04
PRDM1-201ENST00000369089 RANGAP1P46060 587 aaPredicted RBP14.75□□□□□ -0.05
PRDM1-201ENST00000369089 LOC105371045A0A1W2PR82 267 aa14.74□□□□□ -0.05
PRDM1-201ENST00000369089 ERICH6BQ5W0A0 696 aa14.73□□□□□ -0.05
PRDM1-201ENST00000369089 ABCC9O60706 1549 aa14.73□□□□□ -0.05
PRDM1-201ENST00000369089 UBTFP17480 764 aaKnown RBP14.7□□□□□ -0.06
PRDM1-201ENST00000369089 DEKP35659 375 aaKnown RBP14.69□□□□□ -0.06
PRDM1-201ENST00000369089 NBR1Q14596 966 aa14.68□□□□□ -0.06
PRDM1-201ENST00000369089 DCAF1Q9Y4B6 1507 aa14.64□□□□□ -0.07
PRDM1-201ENST00000369089 ANP32AP39687 249 aaKnown RBP14.64□□□□□ -0.07
PRDM1-201ENST00000369089 PODXL2Q9NZ53 605 aa14.63□□□□□ -0.07
PRDM1-201ENST00000369089 RTN4Q9NQC3 1192 aaKnown RBP14.63□□□□□ -0.07
PRDM1-201ENST00000369089 FKBP8Q14318 412 aa14.62□□□□□ -0.07
PRDM1-201ENST00000369089 PKNOX2Q96KN3 472 aa14.61□□□□□ -0.07
PRDM1-201ENST00000369089 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.6□□□□□ -0.07
PRDM1-201ENST00000369089 CCDC136Q96JN2 1154 aa14.6□□□□□ -0.07
PRDM1-201ENST00000369089 ANO8Q9HCE9 1232 aaPredicted RBP14.59□□□□□ -0.07
PRDM1-201ENST00000369089 TSHZ2Q9NRE2 1034 aa14.57□□□□□ -0.08
PRDM1-201ENST00000369089 SUPT16HQ9Y5B9 1047 aaKnown RBP14.55□□□□□ -0.08
PRDM1-201ENST00000369089 PABPN1Q86U42 306 aaKnown RBP eCLIP14.5□□□□□ -0.09
PRDM1-201ENST00000369089 ATP1B4Q9UN42 357 aaPredicted RBP14.49□□□□□ -0.09
PRDM1-201ENST00000369089 ZBTB47Q9UFB7 747 aaPredicted RBP14.47□□□□□ -0.09
PRDM1-201ENST00000369089 UBE2Q2Q8WVN8 375 aa14.46□□□□□ -0.09
PRDM1-201ENST00000369089 MIER1Q8N108 512 aa14.46□□□□□ -0.1
PRDM1-201ENST00000369089 RBM19Q9Y4C8 960 aaKnown RBP14.45□□□□□ -0.1
PRDM1-201ENST00000369089 ZCCHC6Q5VYS8 1495 aaKnown RBP14.45□□□□□ -0.1
PRDM1-201ENST00000369089 VSIG10Q8N0Z9 540 aa14.37□□□□□ -0.11
PRDM1-201ENST00000369089 NEFMP07197 916 aa14.37□□□□□ -0.11
PRDM1-201ENST00000369089 CCDC180Q9P1Z9 1646 aa14.34□□□□□ -0.11
PRDM1-201ENST00000369089 ITGAEP38570 1179 aa14.34□□□□□ -0.11
PRDM1-201ENST00000369089 SALL2Q9Y467 1007 aaPredicted RBP14.34□□□□□ -0.11
PRDM1-201ENST00000369089 NOP58Q9Y2X3 529 aaKnown RBP14.33□□□□□ -0.12
PRDM1-201ENST00000369089 TNNT2P45379 298 aaPredicted RBP14.28□□□□□ -0.12
PRDM1-201ENST00000369089 RSPH6AQ9H0K4 717 aa14.28□□□□□ -0.12
PRDM1-201ENST00000369089 NPM2Q86SE8 214 aaKnown RBP14.27□□□□□ -0.12
PRDM1-201ENST00000369089 NAP1L5Q96NT1 182 aaPredicted RBP14.27□□□□□ -0.13
PRDM1-201ENST00000369089 NCLP19338 710 aaKnown RBP14.26□□□□□ -0.13
PRDM1-201ENST00000369089 A0A0U1RQG5 324 aaPredicted RBP14.25□□□□□ -0.13
PRDM1-201ENST00000369089 HNRNPUL2Q1KMD3 747 aaKnown RBP14.24□□□□□ -0.13
PRDM1-201ENST00000369089 ANP32CO43423 234 aa14.21□□□□□ -0.13
PRDM1-201ENST00000369089 PPM1GO15355 546 aaPredicted RBP14.2□□□□□ -0.14
PRDM1-201ENST00000369089 HSP90AA1P07900 732 aaKnown RBP14.2□□□□□ -0.14
PRDM1-201ENST00000369089 SCRIBQ14160 1630 aa14.19□□□□□ -0.14
PRDM1-201ENST00000369089 CDK11BP21127 795 aaKnown RBP14.15□□□□□ -0.14
PRDM1-201ENST00000369089 HSP90AA2PQ14568 343 aaPredicted RBP14.15□□□□□ -0.14
PRDM1-201ENST00000369089 FANCIQ9NVI1 1328 aa14.1□□□□□ -0.15
PRDM1-201ENST00000369089 TIMELESSQ9UNS1 1208 aa14.09□□□□□ -0.15
PRDM1-201ENST00000369089 ZNF326Q5BKZ1 582 aaKnown RBP14.09□□□□□ -0.15
PRDM1-201ENST00000369089 ANP32BQ92688 251 aaKnown RBP14.08□□□□□ -0.16
PRDM1-201ENST00000369089 PDE4CQ08493 712 aa14.08□□□□□ -0.16
PRDM1-201ENST00000369089 PLEKHG5O94827 1062 aa14.06□□□□□ -0.16
PRDM1-201ENST00000369089 MYO15BQ96JP2 1530 aa14.05□□□□□ -0.16
PRDM1-201ENST00000369089 TRIM44Q96DX7 344 aaPredicted RBP14.04□□□□□ -0.16
PRDM1-201ENST00000369089 LAS1LQ9Y4W2 734 aaKnown RBP14.02□□□□□ -0.16
PRDM1-201ENST00000369089 DDRGK1Q96HY6 314 aa14.02□□□□□ -0.16
PRDM1-201ENST00000369089 TRIM52Q96A61 297 aa14.01□□□□□ -0.17
PRDM1-201ENST00000369089 PNNQ9H307 717 aaKnown RBP14.01□□□□□ -0.17
PRDM1-201ENST00000369089 IRX6P78412 446 aaPredicted RBP13.98□□□□□ -0.17
PRDM1-201ENST00000369089 IL27Q8NEV9 243 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms