RNA–Protein interactions for RNA: ENST00000354956.9

ATG7-202, Transcript of autophagy related 7, humanhuman

TSL 1 (best) BASIC

Gene ATG7, Length 2,296 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG7-202ENST00000354956 NISCHQ9Y2I1 1504 aa22.88■■□□□ 1.25
ATG7-202ENST00000354956 HRCP23327 699 aa19.89■□□□□ 0.77
ATG7-202ENST00000354956 SHROOM4Q9ULL8 1493 aa19.73■□□□□ 0.75
ATG7-202ENST00000354956 SUPT5HO00267 1087 aaKnown RBP19.63■□□□□ 0.73
ATG7-202ENST00000354956 MYO15BQ96JP2 1530 aa19.53■□□□□ 0.72
ATG7-202ENST00000354956 ZCCHC6Q5VYS8 1495 aaKnown RBP19.49■□□□□ 0.71
ATG7-202ENST00000354956 CHIC1Q5VXU3 224 aa19.46■□□□□ 0.71
ATG7-202ENST00000354956 PCGF6Q9BYE7 350 aa19.37■□□□□ 0.69
ATG7-202ENST00000354956 DCAF1Q9Y4B6 1507 aa19.34■□□□□ 0.69
ATG7-202ENST00000354956 CCDC180Q9P1Z9 1646 aa19.28■□□□□ 0.68
ATG7-202ENST00000354956 PPARGC1BQ86YN6 1023 aaKnown RBP19.22■□□□□ 0.67
ATG7-202ENST00000354956 PELP1Q8IZL8 1130 aaKnown RBP19.18■□□□□ 0.66
ATG7-202ENST00000354956 TRIM26Q12899 539 aaPredicted RBP18.99■□□□□ 0.63
ATG7-202ENST00000354956 ZEB1P37275 1124 aaPredicted RBP18.91■□□□□ 0.62
ATG7-202ENST00000354956 LOC105371045A0A1W2PR82 267 aa18.81■□□□□ 0.6
ATG7-202ENST00000354956 SCAF1Q9H7N4 1312 aaKnown RBP18.63■□□□□ 0.57
ATG7-202ENST00000354956 DCAF8L2P0C7V8 631 aa18.57■□□□□ 0.56
ATG7-202ENST00000354956 ABCC9O60706 1549 aa18.52■□□□□ 0.56
ATG7-202ENST00000354956 MYT1Q01538 1121 aa18.48■□□□□ 0.55
ATG7-202ENST00000354956 ACIN1Q9UKV3 1341 aaKnown RBP18.32■□□□□ 0.52
ATG7-202ENST00000354956 TRIM41Q8WV44 630 aa18.31■□□□□ 0.52
ATG7-202ENST00000354956 RSF1Q96T23 1441 aaPredicted RBP18.29■□□□□ 0.52
ATG7-202ENST00000354956 RB1CC1Q8TDY2 1594 aa18.26■□□□□ 0.51
ATG7-202ENST00000354956 NEUROD1Q13562 356 aa18.17■□□□□ 0.5
ATG7-202ENST00000354956 CENPBP07199 599 aaPredicted RBP18.16■□□□□ 0.5
ATG7-202ENST00000354956 FAM9AQ8IZU1 332 aaPredicted RBP18.08■□□□□ 0.48
ATG7-202ENST00000354956 GTF3C3Q9Y5Q9 886 aa18.06■□□□□ 0.48
ATG7-202ENST00000354956 DIEXFQ68CQ4 756 aaKnown RBP18.03■□□□□ 0.48
ATG7-202ENST00000354956 CCER1Q8TC90 406 aaPredicted RBP18.03■□□□□ 0.48
ATG7-202ENST00000354956 SCRIBQ14160 1630 aa18.02■□□□□ 0.48
ATG7-202ENST00000354956 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.98■□□□□ 0.47
ATG7-202ENST00000354956 WRNQ14191 1432 aaPredicted RBP eCLIP17.9■□□□□ 0.469e-6■■■■■ 50.1
ATG7-202ENST00000354956 EHMT2Q96KQ7 1210 aa17.82■□□□□ 0.44
ATG7-202ENST00000354956 EIF4G1Q04637 1599 aaKnown RBP17.82■□□□□ 0.44
ATG7-202ENST00000354956 ZNF316A6NFI3 1004 aaPredicted RBP17.79■□□□□ 0.44
ATG7-202ENST00000354956 MROH2BQ7Z745 1585 aa17.77■□□□□ 0.44
ATG7-202ENST00000354956 BAZ1AQ9NRL2 1556 aaPredicted RBP17.74■□□□□ 0.43
ATG7-202ENST00000354956 CECR2Q9BXF3 1484 aa17.73■□□□□ 0.43
ATG7-202ENST00000354956 WIZO95785 1651 aa17.72■□□□□ 0.43
ATG7-202ENST00000354956 CEP162Q5TB80 1403 aa17.67■□□□□ 0.42
ATG7-202ENST00000354956 NACADO15069 1562 aa17.66■□□□□ 0.42
ATG7-202ENST00000354956 TNIKQ9UKE5 1360 aa17.65■□□□□ 0.42
ATG7-202ENST00000354956 EEA1Q15075 1411 aa17.6■□□□□ 0.41
ATG7-202ENST00000354956 CLSPNQ9HAW4 1339 aa17.57■□□□□ 0.4
ATG7-202ENST00000354956 MIER1Q8N108 512 aa17.53■□□□□ 0.4
ATG7-202ENST00000354956 YTHDC1Q96MU7 727 aaKnown RBP17.53■□□□□ 0.4
ATG7-202ENST00000354956 CCDC88BA6NC98 1476 aa17.53■□□□□ 0.4
ATG7-202ENST00000354956 TOP2AP11388 1531 aaKnown RBP17.51■□□□□ 0.39
ATG7-202ENST00000354956 ABCC8Q09428 1581 aa17.49■□□□□ 0.39
ATG7-202ENST00000354956 GOLGA3Q08378 1498 aa17.45■□□□□ 0.38
ATG7-202ENST00000354956 TTBK1Q5TCY1 1321 aaPredicted RBP17.44■□□□□ 0.38
ATG7-202ENST00000354956 SOGA1O94964 1423 aa17.43■□□□□ 0.38
ATG7-202ENST00000354956 CSRNP3Q8WYN3 585 aa17.41■□□□□ 0.38
ATG7-202ENST00000354956 SMARCA2P51531 1590 aa17.41■□□□□ 0.38
ATG7-202ENST00000354956 UBTFP17480 764 aaKnown RBP17.33■□□□□ 0.37
ATG7-202ENST00000354956 KIF21BO75037 1637 aa17.32■□□□□ 0.36
ATG7-202ENST00000354956 SMARCA4P51532 1647 aa17.32■□□□□ 0.36
ATG7-202ENST00000354956 RUSC2Q8N2Y8 1516 aa17.3■□□□□ 0.36
ATG7-202ENST00000354956 CEP164Q9UPV0 1460 aa17.29■□□□□ 0.36
ATG7-202ENST00000354956 SUPT16HQ9Y5B9 1047 aaKnown RBP17.28■□□□□ 0.36
ATG7-202ENST00000354956 HNRNPUL2Q1KMD3 747 aaKnown RBP17.27■□□□□ 0.35
ATG7-202ENST00000354956 VPS8Q8N3P4 1428 aa17.26■□□□□ 0.35
ATG7-202ENST00000354956 BAZ1BQ9UIG0 1483 aaKnown RBP17.23■□□□□ 0.35
ATG7-202ENST00000354956 CLIP1P30622 1438 aa17.22■□□□□ 0.35
ATG7-202ENST00000354956 ANP32EQ9BTT0 268 aa17.21■□□□□ 0.35
ATG7-202ENST00000354956 TSHZ2Q9NRE2 1034 aa17.17■□□□□ 0.34
ATG7-202ENST00000354956 DHX57Q6P158 1386 aaKnown RBP17.14■□□□□ 0.33
ATG7-202ENST00000354956 APLP2Q06481 763 aa17.14■□□□□ 0.33
ATG7-202ENST00000354956 SYNJ1O43426 1573 aa17.07■□□□□ 0.32
ATG7-202ENST00000354956 CUX2O14529 1486 aa17.02■□□□□ 0.32
ATG7-202ENST00000354956 PEG3Q9GZU2 1588 aa17.01■□□□□ 0.31
ATG7-202ENST00000354956 RAPGEF2Q9Y4G8 1499 aa17■□□□□ 0.31
ATG7-202ENST00000354956 BCL11AQ9H165 835 aa16.99■□□□□ 0.31
ATG7-202ENST00000354956 UNC13AQ9UPW8 1703 aa16.98■□□□□ 0.31
ATG7-202ENST00000354956 RRBP1Q9P2E9 1410 aaKnown RBP16.97■□□□□ 0.31
ATG7-202ENST00000354956 ERICH3Q5RHP9 1530 aa16.94■□□□□ 0.3
ATG7-202ENST00000354956 ARAP1Q96P48 1450 aa16.9■□□□□ 0.3
ATG7-202ENST00000354956 TOP2BQ02880 1626 aa16.86■□□□□ 0.29
ATG7-202ENST00000354956 PRXQ9BXM0 1461 aa16.84■□□□□ 0.29
ATG7-202ENST00000354956 BIVM-ERCC5R4GMW8 1640 aa16.82■□□□□ 0.28
ATG7-202ENST00000354956 CCNB3Q8WWL7 1395 aa16.81■□□□□ 0.28
ATG7-202ENST00000354956 FKBP8Q14318 412 aa16.8■□□□□ 0.28
ATG7-202ENST00000354956 KANK4Q5T7N3 995 aaPredicted RBP16.79■□□□□ 0.28
ATG7-202ENST00000354956 MAPKBP1O60336 1514 aa16.78■□□□□ 0.28
ATG7-202ENST00000354956 RBM19Q9Y4C8 960 aaKnown RBP16.78■□□□□ 0.28
ATG7-202ENST00000354956 NEFLP07196 543 aa16.77■□□□□ 0.28
ATG7-202ENST00000354956 KCNH8Q96L42 1107 aa16.77■□□□□ 0.27
ATG7-202ENST00000354956 BCANQ96GW7 911 aa16.75■□□□□ 0.27
ATG7-202ENST00000354956 CCER2I3L3R5 266 aa16.73■□□□□ 0.27
ATG7-202ENST00000354956 RAB3GAP2Q9H2M9 1393 aa16.71■□□□□ 0.27
ATG7-202ENST00000354956 RANGAP1P46060 587 aaPredicted RBP16.71■□□□□ 0.27
ATG7-202ENST00000354956 BICRAQ9NZM4 1560 aa16.71■□□□□ 0.27
ATG7-202ENST00000354956 MAP3K1Q13233 1512 aa16.7■□□□□ 0.26
ATG7-202ENST00000354956 ATAD2BQ9ULI0 1458 aa16.7■□□□□ 0.26
ATG7-202ENST00000354956 TIMELESSQ9UNS1 1208 aa16.7■□□□□ 0.26
ATG7-202ENST00000354956 PPP1R15AO75807 674 aaPredicted RBP16.68■□□□□ 0.26
ATG7-202ENST00000354956 WDR97A6NE52 1622 aa16.67■□□□□ 0.26
ATG7-202ENST00000354956 SETD5Q9C0A6 1442 aa16.66■□□□□ 0.26
ATG7-202ENST00000354956 ARHGAP35Q9NRY4 1499 aa16.65■□□□□ 0.26
ATG7-202ENST00000354956 DDX10Q13206 875 aaKnown RBP16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms