RNA–Protein interactions for RNA: ENST00000262138.3

CACNG4-201, Transcript of calcium voltage-gated channel auxiliary subunit gamma 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CACNG4, Length 3,380 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNG4-201ENST00000262138 NISCHQ9Y2I1 1504 aa21.56■■□□□ 1.04
CACNG4-201ENST00000262138 HRCP23327 699 aa19.78■□□□□ 0.76
CACNG4-201ENST00000262138 PPARGC1BQ86YN6 1023 aaKnown RBP19.37■□□□□ 0.69
CACNG4-201ENST00000262138 PELP1Q8IZL8 1130 aaKnown RBP19.28■□□□□ 0.68
CACNG4-201ENST00000262138 PCGF6Q9BYE7 350 aa19.27■□□□□ 0.67
CACNG4-201ENST00000262138 MYO15BQ96JP2 1530 aa19.21■□□□□ 0.67
CACNG4-201ENST00000262138 SHROOM4Q9ULL8 1493 aa19.2■□□□□ 0.66
CACNG4-201ENST00000262138 SUPT5HO00267 1087 aaKnown RBP19.16■□□□□ 0.66
CACNG4-201ENST00000262138 CHIC1Q5VXU3 224 aa18.95■□□□□ 0.62
CACNG4-201ENST00000262138 SCAF1Q9H7N4 1312 aaKnown RBP18.82■□□□□ 0.6
CACNG4-201ENST00000262138 DCAF1Q9Y4B6 1507 aa18.81■□□□□ 0.6
CACNG4-201ENST00000262138 CCDC180Q9P1Z9 1646 aa18.64■□□□□ 0.57
CACNG4-201ENST00000262138 TRIM26Q12899 539 aaPredicted RBP18.6■□□□□ 0.57
CACNG4-201ENST00000262138 MYT1Q01538 1121 aa18.56■□□□□ 0.56
CACNG4-201ENST00000262138 LOC105371045A0A1W2PR82 267 aa18.52■□□□□ 0.56
CACNG4-201ENST00000262138 ZEB1P37275 1124 aaPredicted RBP18.48■□□□□ 0.55
CACNG4-201ENST00000262138 ZCCHC6Q5VYS8 1495 aaKnown RBP18.41■□□□□ 0.54
CACNG4-201ENST00000262138 ACIN1Q9UKV3 1341 aaKnown RBP18.28■□□□□ 0.52
CACNG4-201ENST00000262138 NEUROD1Q13562 356 aa18.24■□□□□ 0.51
CACNG4-201ENST00000262138 GTF3C3Q9Y5Q9 886 aa18.14■□□□□ 0.49
CACNG4-201ENST00000262138 CENPBP07199 599 aaPredicted RBP17.99■□□□□ 0.47
CACNG4-201ENST00000262138 DIEXFQ68CQ4 756 aaKnown RBP17.87■□□□□ 0.45
CACNG4-201ENST00000262138 DCAF8L2P0C7V8 631 aa17.82■□□□□ 0.44
CACNG4-201ENST00000262138 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.8■□□□□ 0.44
CACNG4-201ENST00000262138 CCER1Q8TC90 406 aaPredicted RBP17.76■□□□□ 0.43
CACNG4-201ENST00000262138 FAM9AQ8IZU1 332 aaPredicted RBP17.71■□□□□ 0.43
CACNG4-201ENST00000262138 TRIM41Q8WV44 630 aa17.7■□□□□ 0.42
CACNG4-201ENST00000262138 EHMT2Q96KQ7 1210 aa17.64■□□□□ 0.41
CACNG4-201ENST00000262138 YTHDC1Q96MU7 727 aaKnown RBP17.59■□□□□ 0.41
CACNG4-201ENST00000262138 ABCC9O60706 1549 aa17.55■□□□□ 0.4
CACNG4-201ENST00000262138 ZNF316A6NFI3 1004 aaPredicted RBP17.48■□□□□ 0.39
CACNG4-201ENST00000262138 TTBK1Q5TCY1 1321 aaPredicted RBP17.45■□□□□ 0.38
CACNG4-201ENST00000262138 RB1CC1Q8TDY2 1594 aa17.44■□□□□ 0.38
CACNG4-201ENST00000262138 RSF1Q96T23 1441 aaPredicted RBP17.43■□□□□ 0.38
CACNG4-201ENST00000262138 BCL11AQ9H165 835 aa17.41■□□□□ 0.38
CACNG4-201ENST00000262138 MIER1Q8N108 512 aa17.41■□□□□ 0.38
CACNG4-201ENST00000262138 SLC24A1O60721 1099 aa17.38■□□□□ 0.37
CACNG4-201ENST00000262138 ANP32EQ9BTT0 268 aa17.32■□□□□ 0.36
CACNG4-201ENST00000262138 SUPT16HQ9Y5B9 1047 aaKnown RBP17.24■□□□□ 0.35
CACNG4-201ENST00000262138 WRNQ14191 1432 aaPredicted RBP eCLIP17.21■□□□□ 0.35
CACNG4-201ENST00000262138 TSHZ2Q9NRE2 1034 aa17.21■□□□□ 0.35
CACNG4-201ENST00000262138 CLSPNQ9HAW4 1339 aa17.18■□□□□ 0.34
CACNG4-201ENST00000262138 PRKCSHP14314 528 aaPredicted RBP17.16■□□□□ 0.34
CACNG4-201ENST00000262138 CSRNP3Q8WYN3 585 aa17.15■□□□□ 0.34
CACNG4-201ENST00000262138 CEP162Q5TB80 1403 aa17.07■□□□□ 0.32
CACNG4-201ENST00000262138 SCRIBQ14160 1630 aa17.07■□□□□ 0.32
CACNG4-201ENST00000262138 EIF4G1Q04637 1599 aaKnown RBP16.95■□□□□ 0.3
CACNG4-201ENST00000262138 HNRNPUL2Q1KMD3 747 aaKnown RBP16.93■□□□□ 0.3
CACNG4-201ENST00000262138 TNIKQ9UKE5 1360 aa16.91■□□□□ 0.3
CACNG4-201ENST00000262138 MROH2BQ7Z745 1585 aa16.88■□□□□ 0.29
CACNG4-201ENST00000262138 CECR2Q9BXF3 1484 aa16.88■□□□□ 0.29
CACNG4-201ENST00000262138 ERICH6Q7L0X2 663 aa16.86■□□□□ 0.29
CACNG4-201ENST00000262138 CCDC88BA6NC98 1476 aa16.85■□□□□ 0.29
CACNG4-201ENST00000262138 WIZO95785 1651 aa16.85■□□□□ 0.29
CACNG4-201ENST00000262138 ABCC8Q09428 1581 aa16.84■□□□□ 0.29
CACNG4-201ENST00000262138 BCANQ96GW7 911 aa16.82■□□□□ 0.28
CACNG4-201ENST00000262138 SOGA1O94964 1423 aa16.8■□□□□ 0.28
CACNG4-201ENST00000262138 RBM19Q9Y4C8 960 aaKnown RBP16.77■□□□□ 0.28
CACNG4-201ENST00000262138 UBTFP17480 764 aaKnown RBP16.75■□□□□ 0.27
CACNG4-201ENST00000262138 BAZ1AQ9NRL2 1556 aaPredicted RBP16.74■□□□□ 0.27
CACNG4-201ENST00000262138 FKBP8Q14318 412 aa16.72■□□□□ 0.27
CACNG4-201ENST00000262138 KCNH8Q96L42 1107 aa16.71■□□□□ 0.27
CACNG4-201ENST00000262138 RUSC2Q8N2Y8 1516 aa16.7■□□□□ 0.26
CACNG4-201ENST00000262138 GOLGA3Q08378 1498 aa16.69■□□□□ 0.26
CACNG4-201ENST00000262138 MSH5O43196 834 aa16.67■□□□□ 0.26
CACNG4-201ENST00000262138 DHX57Q6P158 1386 aaKnown RBP16.67■□□□□ 0.26
CACNG4-201ENST00000262138 EEA1Q15075 1411 aa16.67■□□□□ 0.26
CACNG4-201ENST00000262138 APLP2Q06481 763 aa16.66■□□□□ 0.26
CACNG4-201ENST00000262138 NACADO15069 1562 aa16.65■□□□□ 0.26
CACNG4-201ENST00000262138 ITGAEP38570 1179 aa16.58■□□□□ 0.24
CACNG4-201ENST00000262138 CLIP1P30622 1438 aa16.58■□□□□ 0.24
CACNG4-201ENST00000262138 VPS8Q8N3P4 1428 aa16.58■□□□□ 0.24
CACNG4-201ENST00000262138 NEFLP07196 543 aa16.54■□□□□ 0.24
CACNG4-201ENST00000262138 TOP2AP11388 1531 aaKnown RBP16.5■□□□□ 0.23
CACNG4-201ENST00000262138 FANCIQ9NVI1 1328 aa16.5■□□□□ 0.23
CACNG4-201ENST00000262138 CEP164Q9UPV0 1460 aa16.49■□□□□ 0.23
CACNG4-201ENST00000262138 SMARCA2P51531 1590 aa16.48■□□□□ 0.23
CACNG4-201ENST00000262138 KIF21BO75037 1637 aa16.47■□□□□ 0.23
CACNG4-201ENST00000262138 TRIM52Q96A61 297 aa16.41■□□□□ 0.22
CACNG4-201ENST00000262138 DEKP35659 375 aaKnown RBP16.39■□□□□ 0.21
CACNG4-201ENST00000262138 DDX10Q13206 875 aaKnown RBP16.38■□□□□ 0.21
CACNG4-201ENST00000262138 MYT1LQ9UL68 1186 aa16.37■□□□□ 0.21
CACNG4-201ENST00000262138 BAZ1BQ9UIG0 1483 aaKnown RBP16.36■□□□□ 0.21
CACNG4-201ENST00000262138 CUX2O14529 1486 aa16.35■□□□□ 0.21
CACNG4-201ENST00000262138 DAXXQ9UER7 740 aaPredicted RBP16.35■□□□□ 0.21
CACNG4-201ENST00000262138 RANGAP1P46060 587 aaPredicted RBP16.34■□□□□ 0.21
CACNG4-201ENST00000262138 RAPGEF2Q9Y4G8 1499 aa16.33■□□□□ 0.21
CACNG4-201ENST00000262138 CDK11AQ9UQ88 783 aaPredicted RBP16.32■□□□□ 0.2
CACNG4-201ENST00000262138 ANO8Q9HCE9 1232 aaPredicted RBP16.31■□□□□ 0.2
CACNG4-201ENST00000262138 PPP1R15AO75807 674 aaPredicted RBP16.31■□□□□ 0.2
CACNG4-201ENST00000262138 RRBP1Q9P2E9 1410 aaKnown RBP16.31■□□□□ 0.2
CACNG4-201ENST00000262138 MAPKBP1O60336 1514 aa16.3■□□□□ 0.2
CACNG4-201ENST00000262138 KANK4Q5T7N3 995 aaPredicted RBP16.29■□□□□ 0.2
CACNG4-201ENST00000262138 CCER2I3L3R5 266 aa16.29■□□□□ 0.2
CACNG4-201ENST00000262138 WDR97A6NE52 1622 aa16.28■□□□□ 0.2
CACNG4-201ENST00000262138 SYNJ1O43426 1573 aa16.28■□□□□ 0.2
CACNG4-201ENST00000262138 SMARCA4P51532 1647 aa16.27■□□□□ 0.2
CACNG4-201ENST00000262138 IRX6P78412 446 aaPredicted RBP16.25■□□□□ 0.19
CACNG4-201ENST00000262138 ANP32CO43423 234 aa16.22■□□□□ 0.19
CACNG4-201ENST00000262138 ARAP1Q96P48 1450 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms