Protein–RNA interactions for Protein: Q96FN4

CPNE2, Copine-2, humanhuman

Predicted RBP Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE2Q96FN4 AL590560.3-201ENST00000623350 461 ntBASIC12.98□□□□□ -0.33
CPNE2Q96FN4 MTA3-202ENST00000405592 5832 ntTSL 2 BASIC12.98□□□□□ -0.33
CPNE2Q96FN4 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC12.98□□□□□ -0.33
CPNE2Q96FN4 SLC9A7P1-202ENST00000556476 2239 ntBASIC12.98□□□□□ -0.33
CPNE2Q96FN4 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CPNE2Q96FN4 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
CPNE2Q96FN4 PRDM10-202ENST00000358825 6322 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CPNE2Q96FN4 PRDM10-203ENST00000360871 6301 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CPNE2Q96FN4 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
CPNE2Q96FN4 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CPNE2Q96FN4 STIM1-220ENST00000616714 4356 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CPNE2Q96FN4 RET-205ENST00000615310 4337 ntTSL 5 BASIC12.98□□□□□ -0.33
CPNE2Q96FN4 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CPNE2Q96FN4 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC12.98□□□□□ -0.33
CPNE2Q96FN4 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC12.98□□□□□ -0.33
CPNE2Q96FN4 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CPNE2Q96FN4 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CPNE2Q96FN4 FAM219A-201ENST00000297620 3588 ntAPPRIS P3 TSL 2 BASIC12.97□□□□□ -0.33
CPNE2Q96FN4 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
CPNE2Q96FN4 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC12.97□□□□□ -0.33
CPNE2Q96FN4 OLFML2A-203ENST00000373580 6425 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
CPNE2Q96FN4 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC12.97□□□□□ -0.33
CPNE2Q96FN4 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC12.97□□□□□ -0.33
CPNE2Q96FN4 ENTPD4-202ENST00000358689 5861 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
CPNE2Q96FN4 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CPNE2Q96FN4 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
CPNE2Q96FN4 CHRFAM7A-201ENST00000299847 6220 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CPNE2Q96FN4 CTR9-201ENST00000361367 4586 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CPNE2Q96FN4 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
CPNE2Q96FN4 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CPNE2Q96FN4 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
CPNE2Q96FN4 AL139385.1-201ENST00000611744 3272 ntBASIC12.97□□□□□ -0.33
CPNE2Q96FN4 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC12.97□□□□□ -0.33
CPNE2Q96FN4 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
CPNE2Q96FN4 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
CPNE2Q96FN4 AL928921.2-201ENST00000641325 2442 ntBASIC12.97□□□□□ -0.33
CPNE2Q96FN4 COL6A1-201ENST00000361866 4238 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
CPNE2Q96FN4 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
CPNE2Q96FN4 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
CPNE2Q96FN4 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CPNE2Q96FN4 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
CPNE2Q96FN4 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC12.97□□□□□ -0.33
CPNE2Q96FN4 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC12.97□□□□□ -0.33
CPNE2Q96FN4 MIR943-201ENST00000401286 94 ntBASIC12.97□□□□□ -0.33
CPNE2Q96FN4 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC12.97□□□□□ -0.33
CPNE2Q96FN4 TREML5P-201ENST00000421694 576 ntBASIC12.97□□□□□ -0.33
CPNE2Q96FN4 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC12.97□□□□□ -0.33
CPNE2Q96FN4 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CPNE2Q96FN4 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC12.97□□□□□ -0.33
CPNE2Q96FN4 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
CPNE2Q96FN4 FAM86LP-201ENST00000478302 853 ntBASIC12.97□□□□□ -0.33
CPNE2Q96FN4 AC026410.3-201ENST00000514280 936 ntBASIC12.97□□□□□ -0.33
CPNE2Q96FN4 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC12.97□□□□□ -0.33
CPNE2Q96FN4 RRP7BP-205ENST00000566851 833 ntBASIC12.97□□□□□ -0.33
CPNE2Q96FN4 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC12.97□□□□□ -0.33
CPNE2Q96FN4 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
CPNE2Q96FN4 AL049840.4-201ENST00000602422 811 ntBASIC12.97□□□□□ -0.33
CPNE2Q96FN4 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC12.97□□□□□ -0.33
CPNE2Q96FN4 BX539320.1-201ENST00000623759 877 ntBASIC12.97□□□□□ -0.33
CPNE2Q96FN4 LDB3-202ENST00000361373 5297 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
CPNE2Q96FN4 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC12.97□□□□□ -0.33
CPNE2Q96FN4 GLIS3-201ENST00000324333 6667 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
CPNE2Q96FN4 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CPNE2Q96FN4 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
CPNE2Q96FN4 DGKE-201ENST00000284061 8660 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CPNE2Q96FN4 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
CPNE2Q96FN4 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
CPNE2Q96FN4 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC12.97□□□□□ -0.33
CPNE2Q96FN4 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CPNE2Q96FN4 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC12.97□□□□□ -0.33
CPNE2Q96FN4 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
CPNE2Q96FN4 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
CPNE2Q96FN4 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
CPNE2Q96FN4 GALC-206ENST00000544807 2528 ntTSL 2 BASIC12.97□□□□□ -0.33
CPNE2Q96FN4 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
CPNE2Q96FN4 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
CPNE2Q96FN4 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
CPNE2Q96FN4 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CPNE2Q96FN4 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CPNE2Q96FN4 CC2D1B-201ENST00000284376 3377 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
CPNE2Q96FN4 ADAMTS13-202ENST00000356589 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
CPNE2Q96FN4 BRPF1-205ENST00000433861 4304 ntTSL 2 BASIC12.97□□□□□ -0.33
CPNE2Q96FN4 CDK12-201ENST00000430627 5918 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CPNE2Q96FN4 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
CPNE2Q96FN4 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
CPNE2Q96FN4 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC12.96□□□□□ -0.33
CPNE2Q96FN4 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
CPNE2Q96FN4 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC12.96□□□□□ -0.33
CPNE2Q96FN4 PPFIA4-203ENST00000367240 6434 ntAPPRIS P5 TSL 5 BASIC12.96□□□□□ -0.33
CPNE2Q96FN4 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
CPNE2Q96FN4 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
CPNE2Q96FN4 KIAA1217-209ENST00000430453 5962 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
CPNE2Q96FN4 KIAA1217-211ENST00000458595 5977 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
CPNE2Q96FN4 HAGLR-202ENST00000416928 4235 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
CPNE2Q96FN4 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC12.96□□□□□ -0.33
CPNE2Q96FN4 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
CPNE2Q96FN4 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
CPNE2Q96FN4 CYP26B1-201ENST00000001146 4732 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
CPNE2Q96FN4 MVK-214ENST00000629016 1591 ntTSL 5 BASIC12.96□□□□□ -0.33
CPNE2Q96FN4 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC12.96□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 61.8 ms