Protein–RNA interactions for Protein: Q86YQ8

CPNE8, Copine-8, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8Q86YQ8 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CPNE8Q86YQ8 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CPNE8Q86YQ8 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
CPNE8Q86YQ8 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CPNE8Q86YQ8 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
CPNE8Q86YQ8 MBLAC2-202ENST00000514906 1936 ntBASIC15.47■□□□□ 0.07
CPNE8Q86YQ8 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CPNE8Q86YQ8 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC15.47■□□□□ 0.07
CPNE8Q86YQ8 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CPNE8Q86YQ8 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
CPNE8Q86YQ8 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC15.47■□□□□ 0.07
CPNE8Q86YQ8 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CPNE8Q86YQ8 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CPNE8Q86YQ8 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
CPNE8Q86YQ8 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CPNE8Q86YQ8 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC15.47■□□□□ 0.07
CPNE8Q86YQ8 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
CPNE8Q86YQ8 VPS18-202ENST00000558474 873 ntTSL 3 BASIC15.47■□□□□ 0.07
CPNE8Q86YQ8 GREM1-201ENST00000560677 623 ntTSL 4 BASIC15.47■□□□□ 0.07
CPNE8Q86YQ8 AC025279.2-201ENST00000569730 653 ntBASIC15.47■□□□□ 0.07
CPNE8Q86YQ8 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CPNE8Q86YQ8 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC15.47■□□□□ 0.07
CPNE8Q86YQ8 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CPNE8Q86YQ8 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC15.47■□□□□ 0.07
CPNE8Q86YQ8 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CPNE8Q86YQ8 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC15.47■□□□□ 0.07
CPNE8Q86YQ8 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
CPNE8Q86YQ8 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC15.47■□□□□ 0.07
CPNE8Q86YQ8 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC15.47■□□□□ 0.07
CPNE8Q86YQ8 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CPNE8Q86YQ8 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CPNE8Q86YQ8 LSS-211ENST00000522411 2523 ntTSL 2 BASIC15.47■□□□□ 0.07
CPNE8Q86YQ8 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC15.47■□□□□ 0.07
CPNE8Q86YQ8 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
CPNE8Q86YQ8 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CPNE8Q86YQ8 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CPNE8Q86YQ8 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC15.47■□□□□ 0.07
CPNE8Q86YQ8 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
CPNE8Q86YQ8 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CPNE8Q86YQ8 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CPNE8Q86YQ8 POLL-206ENST00000370172 2308 ntTSL 2 BASIC15.46■□□□□ 0.07
CPNE8Q86YQ8 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
CPNE8Q86YQ8 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC15.46■□□□□ 0.07
CPNE8Q86YQ8 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
CPNE8Q86YQ8 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CPNE8Q86YQ8 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CPNE8Q86YQ8 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC15.46■□□□□ 0.07
CPNE8Q86YQ8 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CPNE8Q86YQ8 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC15.46■□□□□ 0.07
CPNE8Q86YQ8 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.07
CPNE8Q86YQ8 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC15.46■□□□□ 0.07
CPNE8Q86YQ8 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CPNE8Q86YQ8 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
CPNE8Q86YQ8 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
CPNE8Q86YQ8 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CPNE8Q86YQ8 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
CPNE8Q86YQ8 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CPNE8Q86YQ8 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CPNE8Q86YQ8 AP006294.1-201ENST00000415407 339 ntBASIC15.46■□□□□ 0.07
CPNE8Q86YQ8 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC15.46■□□□□ 0.07
CPNE8Q86YQ8 FAM197Y7-201ENST00000432892 766 ntBASIC15.46■□□□□ 0.07
CPNE8Q86YQ8 INE1-201ENST00000456273 945 ntBASIC15.46■□□□□ 0.07
CPNE8Q86YQ8 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
CPNE8Q86YQ8 FTLP10-202ENST00000505798 471 ntBASIC15.46■□□□□ 0.07
CPNE8Q86YQ8 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC15.46■□□□□ 0.07
CPNE8Q86YQ8 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC15.46■□□□□ 0.07
CPNE8Q86YQ8 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC15.46■□□□□ 0.07
CPNE8Q86YQ8 AC008735.3-201ENST00000596646 500 ntBASIC15.46■□□□□ 0.07
CPNE8Q86YQ8 IGHV3-72-202ENST00000621503 303 ntBASIC15.46■□□□□ 0.07
CPNE8Q86YQ8 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CPNE8Q86YQ8 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CPNE8Q86YQ8 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CPNE8Q86YQ8 AC130686.1-201ENST00000622936 2466 ntBASIC15.46■□□□□ 0.07
CPNE8Q86YQ8 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
CPNE8Q86YQ8 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CPNE8Q86YQ8 MYO15B-237ENST00000642007 4893 ntBASIC15.46■□□□□ 0.07
CPNE8Q86YQ8 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
CPNE8Q86YQ8 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
CPNE8Q86YQ8 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CPNE8Q86YQ8 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CPNE8Q86YQ8 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CPNE8Q86YQ8 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC15.46■□□□□ 0.07
CPNE8Q86YQ8 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC15.46■□□□□ 0.07
CPNE8Q86YQ8 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
CPNE8Q86YQ8 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
CPNE8Q86YQ8 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
CPNE8Q86YQ8 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
CPNE8Q86YQ8 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
CPNE8Q86YQ8 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.06
CPNE8Q86YQ8 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.06
CPNE8Q86YQ8 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
CPNE8Q86YQ8 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC15.46■□□□□ 0.06
CPNE8Q86YQ8 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
CPNE8Q86YQ8 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC15.46■□□□□ 0.06
CPNE8Q86YQ8 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.06
CPNE8Q86YQ8 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC15.45■□□□□ 0.06
CPNE8Q86YQ8 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC15.45■□□□□ 0.06
CPNE8Q86YQ8 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
CPNE8Q86YQ8 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
CPNE8Q86YQ8 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC15.45■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms