Protein–RNA interactions for Protein: Q2MKA7

RSPO1, R-spondin-1, humanhuman

Predicted RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO1Q2MKA7 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
RSPO1Q2MKA7 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC12.76□□□□□ -0.37
RSPO1Q2MKA7 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
RSPO1Q2MKA7 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
RSPO1Q2MKA7 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
RSPO1Q2MKA7 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC12.76□□□□□ -0.37
RSPO1Q2MKA7 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
RSPO1Q2MKA7 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
RSPO1Q2MKA7 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
RSPO1Q2MKA7 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC12.76□□□□□ -0.37
RSPO1Q2MKA7 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC12.76□□□□□ -0.37
RSPO1Q2MKA7 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
RSPO1Q2MKA7 C1R-201ENST00000535233 2211 ntTSL 2 BASIC12.76□□□□□ -0.37
RSPO1Q2MKA7 MST1P2-201ENST00000457982 2291 ntBASIC12.76□□□□□ -0.37
RSPO1Q2MKA7 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
RSPO1Q2MKA7 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
RSPO1Q2MKA7 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
RSPO1Q2MKA7 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
RSPO1Q2MKA7 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
RSPO1Q2MKA7 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
RSPO1Q2MKA7 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
RSPO1Q2MKA7 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC12.75□□□□□ -0.37
RSPO1Q2MKA7 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
RSPO1Q2MKA7 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
RSPO1Q2MKA7 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
RSPO1Q2MKA7 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
RSPO1Q2MKA7 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
RSPO1Q2MKA7 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
RSPO1Q2MKA7 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
RSPO1Q2MKA7 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
RSPO1Q2MKA7 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
RSPO1Q2MKA7 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
RSPO1Q2MKA7 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
RSPO1Q2MKA7 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
RSPO1Q2MKA7 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
RSPO1Q2MKA7 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC12.75□□□□□ -0.37
RSPO1Q2MKA7 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
RSPO1Q2MKA7 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
RSPO1Q2MKA7 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
RSPO1Q2MKA7 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
RSPO1Q2MKA7 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC12.75□□□□□ -0.37
RSPO1Q2MKA7 CTBP2P5-201ENST00000454986 1264 ntBASIC12.75□□□□□ -0.37
RSPO1Q2MKA7 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
RSPO1Q2MKA7 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC12.75□□□□□ -0.37
RSPO1Q2MKA7 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
RSPO1Q2MKA7 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
RSPO1Q2MKA7 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC12.75□□□□□ -0.37
RSPO1Q2MKA7 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
RSPO1Q2MKA7 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC12.75□□□□□ -0.37
RSPO1Q2MKA7 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
RSPO1Q2MKA7 SNX29P1-201ENST00000548357 1007 ntBASIC12.75□□□□□ -0.37
RSPO1Q2MKA7 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC12.75□□□□□ -0.37
RSPO1Q2MKA7 MIR4783-201ENST00000580343 82 ntBASIC12.75□□□□□ -0.37
RSPO1Q2MKA7 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC12.75□□□□□ -0.37
RSPO1Q2MKA7 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
RSPO1Q2MKA7 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
RSPO1Q2MKA7 AC008687.7-202ENST00000637404 953 ntBASIC12.75□□□□□ -0.37
RSPO1Q2MKA7 AC009093.10-201ENST00000641956 1442 ntBASIC12.75□□□□□ -0.37
RSPO1Q2MKA7 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
RSPO1Q2MKA7 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
RSPO1Q2MKA7 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
RSPO1Q2MKA7 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC12.75□□□□□ -0.37
RSPO1Q2MKA7 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
RSPO1Q2MKA7 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
RSPO1Q2MKA7 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
RSPO1Q2MKA7 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
RSPO1Q2MKA7 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
RSPO1Q2MKA7 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
RSPO1Q2MKA7 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
RSPO1Q2MKA7 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC12.74□□□□□ -0.37
RSPO1Q2MKA7 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
RSPO1Q2MKA7 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
RSPO1Q2MKA7 SHC1P1-201ENST00000425230 1745 ntBASIC12.74□□□□□ -0.37
RSPO1Q2MKA7 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC12.74□□□□□ -0.37
RSPO1Q2MKA7 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
RSPO1Q2MKA7 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
RSPO1Q2MKA7 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
RSPO1Q2MKA7 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
RSPO1Q2MKA7 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC12.74□□□□□ -0.37
RSPO1Q2MKA7 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
RSPO1Q2MKA7 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
RSPO1Q2MKA7 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
RSPO1Q2MKA7 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
RSPO1Q2MKA7 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC12.74□□□□□ -0.37
RSPO1Q2MKA7 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
RSPO1Q2MKA7 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
RSPO1Q2MKA7 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC12.74□□□□□ -0.37
RSPO1Q2MKA7 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC12.74□□□□□ -0.37
RSPO1Q2MKA7 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC12.74□□□□□ -0.37
RSPO1Q2MKA7 MIR1909-201ENST00000411312 80 ntBASIC12.74□□□□□ -0.37
RSPO1Q2MKA7 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC12.74□□□□□ -0.37
RSPO1Q2MKA7 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC12.74□□□□□ -0.37
RSPO1Q2MKA7 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC12.74□□□□□ -0.37
RSPO1Q2MKA7 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC12.74□□□□□ -0.37
RSPO1Q2MKA7 AL355994.2-201ENST00000447882 704 ntBASIC12.74□□□□□ -0.37
RSPO1Q2MKA7 HIST2H2BB-201ENST00000449108 381 ntBASIC12.74□□□□□ -0.37
RSPO1Q2MKA7 AL035414.1-201ENST00000451327 857 ntBASIC12.74□□□□□ -0.37
RSPO1Q2MKA7 KLF2P4-201ENST00000451959 1225 ntBASIC12.74□□□□□ -0.37
RSPO1Q2MKA7 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC12.74□□□□□ -0.37
RSPO1Q2MKA7 AC100850.1-201ENST00000506768 649 ntBASIC12.74□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms