Protein–RNA interactions for Protein: P52657

GTF2A2, Transcription initiation factor IIA subunit 2, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A2P52657 OXA1L-212ENST00000604262 1571 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
GTF2A2P52657 AC126365.1-201ENST00000578585 1514 ntBASIC16.82■□□□□ 0.28
GTF2A2P52657 VAMP2-202ENST00000404970 1479 ntTSL 2 BASIC16.82■□□□□ 0.28
GTF2A2P52657 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
GTF2A2P52657 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
GTF2A2P52657 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
GTF2A2P52657 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
GTF2A2P52657 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
GTF2A2P52657 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC16.82■□□□□ 0.28
GTF2A2P52657 IFI35-203ENST00000415816 1241 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
GTF2A2P52657 FAM86B3P-203ENST00000523992 854 ntBASIC16.82■□□□□ 0.28
GTF2A2P52657 NACA-221ENST00000552540 1074 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
GTF2A2P52657 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC16.82■□□□□ 0.28
GTF2A2P52657 AL118516.1-201ENST00000564152 670 ntBASIC16.82■□□□□ 0.28
GTF2A2P52657 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
GTF2A2P52657 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
GTF2A2P52657 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
GTF2A2P52657 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
GTF2A2P52657 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
GTF2A2P52657 RBM4B-201ENST00000310046 1840 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
GTF2A2P52657 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
GTF2A2P52657 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
GTF2A2P52657 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
GTF2A2P52657 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC16.81■□□□□ 0.28
GTF2A2P52657 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
GTF2A2P52657 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC16.81■□□□□ 0.28
GTF2A2P52657 TMPRSS4-211ENST00000522307 1634 ntTSL 2 BASIC16.81■□□□□ 0.28
GTF2A2P52657 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC16.81■□□□□ 0.28
GTF2A2P52657 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC16.81■□□□□ 0.28
GTF2A2P52657 SSR4P1-203ENST00000599569 2260 ntBASIC16.81■□□□□ 0.28
GTF2A2P52657 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
GTF2A2P52657 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC16.81■□□□□ 0.28
GTF2A2P52657 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC16.81■□□□□ 0.28
GTF2A2P52657 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC16.81■□□□□ 0.28
GTF2A2P52657 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
GTF2A2P52657 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC16.81■□□□□ 0.28
GTF2A2P52657 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
GTF2A2P52657 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
GTF2A2P52657 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
GTF2A2P52657 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
GTF2A2P52657 MAPK13-202ENST00000373759 1036 ntTSL 5 BASIC16.81■□□□□ 0.28
GTF2A2P52657 NUPL2-202ENST00000410002 680 ntTSL 2 BASIC16.81■□□□□ 0.28
GTF2A2P52657 Metazoa_SRP.9-201ENST00000415635 283 ntBASIC16.81■□□□□ 0.28
GTF2A2P52657 LINC00211-203ENST00000446799 662 ntTSL 3 BASIC16.81■□□□□ 0.28
GTF2A2P52657 LINC01563-201ENST00000456235 750 ntTSL 2 BASIC16.81■□□□□ 0.28
GTF2A2P52657 AC108462.1-201ENST00000457467 850 ntTSL 3 BASIC16.81■□□□□ 0.28
GTF2A2P52657 RN7SL23P-201ENST00000484055 275 ntBASIC16.81■□□□□ 0.28
GTF2A2P52657 DMKN-256ENST00000492341 738 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
GTF2A2P52657 CHTF8-204ENST00000518041 567 ntTSL 2 BASIC16.81■□□□□ 0.28
GTF2A2P52657 PRB3-202ENST00000538488 1283 ntAPPRIS P5 TSL 5 BASIC16.81■□□□□ 0.28
GTF2A2P52657 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
GTF2A2P52657 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC16.81■□□□□ 0.28
GTF2A2P52657 AC055811.3-201ENST00000584952 686 ntBASIC16.81■□□□□ 0.28
GTF2A2P52657 NAMA-206ENST00000605377 509 ntTSL 5 BASIC16.81■□□□□ 0.28
GTF2A2P52657 AC009145.4-201ENST00000625119 1294 ntBASIC16.81■□□□□ 0.28
GTF2A2P52657 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
GTF2A2P52657 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
GTF2A2P52657 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
GTF2A2P52657 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
GTF2A2P52657 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
GTF2A2P52657 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC16.81■□□□□ 0.28
GTF2A2P52657 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
GTF2A2P52657 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC16.81■□□□□ 0.28
GTF2A2P52657 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
GTF2A2P52657 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC16.81■□□□□ 0.28
GTF2A2P52657 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
GTF2A2P52657 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
GTF2A2P52657 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
GTF2A2P52657 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
GTF2A2P52657 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC16.8■□□□□ 0.28
GTF2A2P52657 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
GTF2A2P52657 ATF4-202ENST00000396680 1419 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
GTF2A2P52657 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC16.8■□□□□ 0.28
GTF2A2P52657 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
GTF2A2P52657 CTBP2P8-201ENST00000422584 1330 ntBASIC16.8■□□□□ 0.28
GTF2A2P52657 CCL18-201ENST00000616054 1324 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
GTF2A2P52657 GTF3C6-201ENST00000329970 952 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
GTF2A2P52657 GYPC-203ENST00000409836 932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
GTF2A2P52657 KRT17P4-201ENST00000429445 819 ntBASIC16.8■□□□□ 0.28
GTF2A2P52657 AC098934.1-203ENST00000442868 1262 ntBASIC16.8■□□□□ 0.28
GTF2A2P52657 AL135901.1-201ENST00000451812 333 ntBASIC16.8■□□□□ 0.28
GTF2A2P52657 DMKN-229ENST00000467637 827 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
GTF2A2P52657 AC226150.1-201ENST00000544259 466 ntBASIC16.8■□□□□ 0.28
GTF2A2P52657 HIST2H2BF-204ENST00000545683 999 ntTSL 2 BASIC16.8■□□□□ 0.28
GTF2A2P52657 AC025048.2-201ENST00000590744 786 ntTSL 2 BASIC16.8■□□□□ 0.28
GTF2A2P52657 AP003392.6-201ENST00000607709 325 ntBASIC16.8■□□□□ 0.28
GTF2A2P52657 HTR4-213ENST00000631296 1224 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
GTF2A2P52657 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
GTF2A2P52657 FGD4-203ENST00000472289 1629 ntTSL 2 BASIC16.8■□□□□ 0.28
GTF2A2P52657 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
GTF2A2P52657 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC16.8■□□□□ 0.28
GTF2A2P52657 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC16.8■□□□□ 0.28
GTF2A2P52657 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
GTF2A2P52657 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
GTF2A2P52657 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
GTF2A2P52657 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC16.8■□□□□ 0.28
GTF2A2P52657 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC16.8■□□□□ 0.28
GTF2A2P52657 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC16.8■□□□□ 0.28
GTF2A2P52657 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
GTF2A2P52657 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 57.3 ms