Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 MTUS1-229ENST00000634613 1193 ntTSL 5 BASIC16.42■□□□□ 0.22
TM4SF4P48230 AC139713.2-207ENST00000641556 1292 ntBASIC16.42■□□□□ 0.22
TM4SF4P48230 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC16.42■□□□□ 0.22
TM4SF4P48230 KRT8P18-201ENST00000413425 1445 ntBASIC16.42■□□□□ 0.22
TM4SF4P48230 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TM4SF4P48230 ARRB2-218ENST00000575877 1579 ntTSL 5 BASIC16.42■□□□□ 0.22
TM4SF4P48230 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC16.42■□□□□ 0.22
TM4SF4P48230 C1orf87-202ENST00000450089 1307 ntTSL 5 BASIC16.42■□□□□ 0.22
TM4SF4P48230 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
TM4SF4P48230 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC16.41■□□□□ 0.22
TM4SF4P48230 AC015688.4-201ENST00000580780 1647 ntBASIC16.41■□□□□ 0.22
TM4SF4P48230 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TM4SF4P48230 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TM4SF4P48230 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
TM4SF4P48230 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
TM4SF4P48230 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TM4SF4P48230 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TM4SF4P48230 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TM4SF4P48230 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC16.41■□□□□ 0.22
TM4SF4P48230 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TM4SF4P48230 KRTAP6-1-201ENST00000329122 500 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
TM4SF4P48230 AL356417.1-201ENST00000421161 845 ntTSL 3 BASIC16.41■□□□□ 0.22
TM4SF4P48230 AC078785.1-204ENST00000460707 764 ntTSL 3 BASIC16.41■□□□□ 0.22
TM4SF4P48230 POLR3G-207ENST00000514483 682 ntTSL 3 BASIC16.41■□□□□ 0.22
TM4SF4P48230 AC113133.1-201ENST00000522388 1088 ntTSL 2 BASIC16.41■□□□□ 0.22
TM4SF4P48230 C11orf1-202ENST00000528125 534 ntTSL 2 BASIC16.41■□□□□ 0.22
TM4SF4P48230 AC073896.4-201ENST00000553176 403 ntTSL 2 BASIC16.41■□□□□ 0.22
TM4SF4P48230 AC009055.1-201ENST00000562656 781 ntTSL 3 BASIC16.41■□□□□ 0.22
TM4SF4P48230 MIR4254-201ENST00000581063 76 ntBASIC16.41■□□□□ 0.22
TM4SF4P48230 RN7SL556P-201ENST00000582856 298 ntBASIC16.41■□□□□ 0.22
TM4SF4P48230 KXD1-211ENST00000599319 707 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
TM4SF4P48230 MIAT_exon5_3.1-201ENST00000613656 377 ntBASIC16.41■□□□□ 0.22
TM4SF4P48230 GNG14-201ENST00000640117 210 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
TM4SF4P48230 CRYM-202ENST00000543948 1400 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
TM4SF4P48230 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
TM4SF4P48230 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC16.41■□□□□ 0.22
TM4SF4P48230 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC16.41■□□□□ 0.22
TM4SF4P48230 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TM4SF4P48230 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TM4SF4P48230 COX4I1-208ENST00000564903 1481 ntTSL 2 BASIC16.41■□□□□ 0.22
TM4SF4P48230 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
TM4SF4P48230 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TM4SF4P48230 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TM4SF4P48230 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC16.41■□□□□ 0.22
TM4SF4P48230 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TM4SF4P48230 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
TM4SF4P48230 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC16.4■□□□□ 0.22
TM4SF4P48230 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC16.4■□□□□ 0.22
TM4SF4P48230 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
TM4SF4P48230 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
TM4SF4P48230 VIPAS39-208ENST00000556412 1832 ntTSL 2 BASIC16.4■□□□□ 0.22
TM4SF4P48230 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC16.4■□□□□ 0.22
TM4SF4P48230 MAD2L1BP-202ENST00000451025 1517 ntTSL 2 BASIC16.4■□□□□ 0.22
TM4SF4P48230 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TM4SF4P48230 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TM4SF4P48230 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TM4SF4P48230 CST9-201ENST00000376971 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TM4SF4P48230 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TM4SF4P48230 HNRNPA1-201ENST00000330752 1294 ntTSL 5 BASIC16.4■□□□□ 0.22
TM4SF4P48230 LINC01983-201ENST00000413586 574 ntTSL 2 BASIC16.4■□□□□ 0.22
TM4SF4P48230 IFNWP2-201ENST00000431203 580 ntBASIC16.4■□□□□ 0.22
TM4SF4P48230 AL121987.1-201ENST00000435580 645 ntTSL 3 BASIC16.4■□□□□ 0.22
TM4SF4P48230 AC025594.1-201ENST00000469533 543 ntBASIC16.4■□□□□ 0.22
TM4SF4P48230 LRRC75A-AS1-214ENST00000487066 763 ntTSL 3 BASIC16.4■□□□□ 0.22
TM4SF4P48230 GLUD1P3-201ENST00000507952 896 ntTSL 2 BASIC16.4■□□□□ 0.22
TM4SF4P48230 CTBP2P6-201ENST00000526402 1229 ntBASIC16.4■□□□□ 0.22
TM4SF4P48230 AP004550.1-201ENST00000532652 514 ntTSL 3 BASIC16.4■□□□□ 0.22
TM4SF4P48230 HKR1-220ENST00000591259 734 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TM4SF4P48230 AC080013.5-201ENST00000607044 679 ntBASIC16.4■□□□□ 0.22
TM4SF4P48230 ESR1-214ENST00000638569 132 ntTSL 5 BASIC16.4■□□□□ 0.22
TM4SF4P48230 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC16.4■□□□□ 0.22
TM4SF4P48230 CICP23-201ENST00000605013 2741 ntBASIC16.4■□□□□ 0.22
TM4SF4P48230 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TM4SF4P48230 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC16.4■□□□□ 0.22
TM4SF4P48230 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TM4SF4P48230 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TM4SF4P48230 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
TM4SF4P48230 OR6D1P-203ENST00000641209 4860 ntBASIC16.4■□□□□ 0.22
TM4SF4P48230 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
TM4SF4P48230 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TM4SF4P48230 WDR46-231ENST00000374617 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TM4SF4P48230 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC16.4■□□□□ 0.22
TM4SF4P48230 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TM4SF4P48230 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.22
TM4SF4P48230 AC020658.6-201ENST00000623564 1870 ntBASIC16.39■□□□□ 0.22
TM4SF4P48230 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
TM4SF4P48230 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.22
TM4SF4P48230 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC16.39■□□□□ 0.22
TM4SF4P48230 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TM4SF4P48230 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TM4SF4P48230 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
TM4SF4P48230 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TM4SF4P48230 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TM4SF4P48230 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
TM4SF4P48230 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TM4SF4P48230 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TM4SF4P48230 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
TM4SF4P48230 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TM4SF4P48230 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TM4SF4P48230 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 90.7 ms