Protein–RNA interactions for Protein: P19013

KRT4, Keratin, type II cytoskeletal 4, humanhuman

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT4P19013 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC14.92□□□□□ -0.02
KRT4P19013 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC14.92□□□□□ -0.02
KRT4P19013 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
KRT4P19013 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
KRT4P19013 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
KRT4P19013 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC14.92□□□□□ -0.02
KRT4P19013 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
KRT4P19013 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
KRT4P19013 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
KRT4P19013 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC14.92□□□□□ -0.02
KRT4P19013 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC14.92□□□□□ -0.02
KRT4P19013 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
KRT4P19013 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
KRT4P19013 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
KRT4P19013 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
KRT4P19013 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
KRT4P19013 CHFR-205ENST00000450056 3250 ntTSL 2 BASIC14.91□□□□□ -0.02
KRT4P19013 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
KRT4P19013 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC14.91□□□□□ -0.02
KRT4P19013 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC14.91□□□□□ -0.02
KRT4P19013 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC14.91□□□□□ -0.02
KRT4P19013 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
KRT4P19013 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
KRT4P19013 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
KRT4P19013 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
KRT4P19013 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
KRT4P19013 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
KRT4P19013 HADH-202ENST00000403312 1752 ntTSL 5 BASIC14.91□□□□□ -0.02
KRT4P19013 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
KRT4P19013 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
KRT4P19013 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
KRT4P19013 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC14.91□□□□□ -0.02
KRT4P19013 IL13RA1-202ENST00000371666 4036 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
KRT4P19013 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
KRT4P19013 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
KRT4P19013 AL139400.1-201ENST00000366220 510 ntBASIC14.91□□□□□ -0.02
KRT4P19013 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC14.91□□□□□ -0.02
KRT4P19013 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
KRT4P19013 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC14.91□□□□□ -0.02
KRT4P19013 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
KRT4P19013 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC14.91□□□□□ -0.02
KRT4P19013 FAM200B-201ENST00000422728 2962 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
KRT4P19013 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC14.91□□□□□ -0.02
KRT4P19013 AC112482.1-201ENST00000492080 688 ntBASIC14.91□□□□□ -0.02
KRT4P19013 MEIS3P1-201ENST00000495167 958 ntBASIC14.91□□□□□ -0.02
KRT4P19013 AC026410.3-201ENST00000514280 936 ntBASIC14.91□□□□□ -0.02
KRT4P19013 AC027369.6-201ENST00000525520 931 ntBASIC14.91□□□□□ -0.02
KRT4P19013 RAB35-202ENST00000534951 939 ntTSL 2 BASIC14.91□□□□□ -0.02
KRT4P19013 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
KRT4P19013 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC14.91□□□□□ -0.02
KRT4P19013 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC14.91□□□□□ -0.02
KRT4P19013 AC092364.2-202ENST00000597012 1073 ntBASIC14.91□□□□□ -0.02
KRT4P19013 AL844908.2-201ENST00000609461 460 ntBASIC14.91□□□□□ -0.02
KRT4P19013 AL391069.4-201ENST00000609583 481 ntBASIC14.91□□□□□ -0.02
KRT4P19013 AC011498.7-201ENST00000624986 2027 ntBASIC14.91□□□□□ -0.02
KRT4P19013 AC215219.1-201ENST00000400706 1817 ntBASIC14.91□□□□□ -0.02
KRT4P19013 AC005562.1-201ENST00000583030 3219 ntBASIC14.91□□□□□ -0.02
KRT4P19013 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC14.91□□□□□ -0.02
KRT4P19013 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
KRT4P19013 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
KRT4P19013 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
KRT4P19013 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
KRT4P19013 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
KRT4P19013 HSPA8P5-201ENST00000456928 2069 ntBASIC14.91□□□□□ -0.02
KRT4P19013 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC14.91□□□□□ -0.02
KRT4P19013 GPR68-204ENST00000535815 2859 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
KRT4P19013 RET-205ENST00000615310 4337 ntTSL 5 BASIC14.91□□□□□ -0.02
KRT4P19013 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC14.9□□□□□ -0.02
KRT4P19013 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC14.9□□□□□ -0.02
KRT4P19013 CAMK2B-217ENST00000457475 4142 ntTSL 5 BASIC14.9□□□□□ -0.02
KRT4P19013 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
KRT4P19013 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC14.9□□□□□ -0.02
KRT4P19013 ABCC6P1-201ENST00000546162 2943 ntTSL 2 BASIC14.9□□□□□ -0.02
KRT4P19013 ANGPTL2-202ENST00000373425 3707 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
KRT4P19013 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
KRT4P19013 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
KRT4P19013 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
KRT4P19013 ALOX15B-201ENST00000380173 2605 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
KRT4P19013 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC14.9□□□□□ -0.02
KRT4P19013 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
KRT4P19013 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
KRT4P19013 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
KRT4P19013 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
KRT4P19013 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC14.9□□□□□ -0.02
KRT4P19013 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
KRT4P19013 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
KRT4P19013 LY6E-204ENST00000519546 971 ntTSL 2 BASIC14.9□□□□□ -0.02
KRT4P19013 DAD1-205ENST00000543337 501 ntTSL 3 BASIC14.9□□□□□ -0.02
KRT4P19013 VPS29-207ENST00000549970 818 ntTSL 3 BASIC14.9□□□□□ -0.02
KRT4P19013 DUX4L47-201ENST00000566374 394 ntBASIC14.9□□□□□ -0.02
KRT4P19013 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC14.9□□□□□ -0.02
KRT4P19013 AC010327.4-202ENST00000591484 748 ntBASIC14.9□□□□□ -0.02
KRT4P19013 AL671883.3-201ENST00000603274 991 ntBASIC14.9□□□□□ -0.02
KRT4P19013 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
KRT4P19013 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
KRT4P19013 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC14.9□□□□□ -0.02
KRT4P19013 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC14.9□□□□□ -0.02
KRT4P19013 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC14.9□□□□□ -0.02
KRT4P19013 ATP12A-201ENST00000218548 3732 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
KRT4P19013 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms