Protein–RNA interactions for Protein: Q9H1A7

POLR2J3, DNA-directed RNA polymerase II subunit RPB11-b2, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3Q9H1A7 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
POLR2J3Q9H1A7 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
POLR2J3Q9H1A7 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC13.77□□□□□ -0.2
POLR2J3Q9H1A7 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
POLR2J3Q9H1A7 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
POLR2J3Q9H1A7 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
POLR2J3Q9H1A7 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
POLR2J3Q9H1A7 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC13.77□□□□□ -0.2
POLR2J3Q9H1A7 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC13.77□□□□□ -0.2
POLR2J3Q9H1A7 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
POLR2J3Q9H1A7 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC13.77□□□□□ -0.21
POLR2J3Q9H1A7 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
POLR2J3Q9H1A7 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.21
POLR2J3Q9H1A7 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC13.77□□□□□ -0.21
POLR2J3Q9H1A7 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
POLR2J3Q9H1A7 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
POLR2J3Q9H1A7 AGER-206ENST00000375070 1463 ntTSL 5 BASIC13.77□□□□□ -0.21
POLR2J3Q9H1A7 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
POLR2J3Q9H1A7 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.21
POLR2J3Q9H1A7 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
POLR2J3Q9H1A7 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
POLR2J3Q9H1A7 C1QBPP1-201ENST00000400117 770 ntBASIC13.77□□□□□ -0.21
POLR2J3Q9H1A7 LBH-203ENST00000404397 543 ntTSL 4 BASIC13.77□□□□□ -0.21
POLR2J3Q9H1A7 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC13.77□□□□□ -0.21
POLR2J3Q9H1A7 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
POLR2J3Q9H1A7 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
POLR2J3Q9H1A7 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC13.77□□□□□ -0.21
POLR2J3Q9H1A7 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
POLR2J3Q9H1A7 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
POLR2J3Q9H1A7 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC13.77□□□□□ -0.21
POLR2J3Q9H1A7 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.21
POLR2J3Q9H1A7 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC13.77□□□□□ -0.21
POLR2J3Q9H1A7 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC13.77□□□□□ -0.21
POLR2J3Q9H1A7 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC13.77□□□□□ -0.21
POLR2J3Q9H1A7 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
POLR2J3Q9H1A7 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC13.77□□□□□ -0.21
POLR2J3Q9H1A7 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
POLR2J3Q9H1A7 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC13.77□□□□□ -0.21
POLR2J3Q9H1A7 KRT8P22-201ENST00000562317 1415 ntBASIC13.77□□□□□ -0.21
POLR2J3Q9H1A7 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC13.77□□□□□ -0.21
POLR2J3Q9H1A7 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
POLR2J3Q9H1A7 AC079781.5-202ENST00000641784 3743 ntBASIC13.77□□□□□ -0.21
POLR2J3Q9H1A7 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
POLR2J3Q9H1A7 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
POLR2J3Q9H1A7 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
POLR2J3Q9H1A7 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC13.77□□□□□ -0.21
POLR2J3Q9H1A7 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
POLR2J3Q9H1A7 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
POLR2J3Q9H1A7 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC13.76□□□□□ -0.21
POLR2J3Q9H1A7 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
POLR2J3Q9H1A7 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
POLR2J3Q9H1A7 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
POLR2J3Q9H1A7 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC13.76□□□□□ -0.21
POLR2J3Q9H1A7 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC13.76□□□□□ -0.21
POLR2J3Q9H1A7 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
POLR2J3Q9H1A7 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
POLR2J3Q9H1A7 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
POLR2J3Q9H1A7 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC13.76□□□□□ -0.21
POLR2J3Q9H1A7 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
POLR2J3Q9H1A7 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
POLR2J3Q9H1A7 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
POLR2J3Q9H1A7 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
POLR2J3Q9H1A7 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC13.76□□□□□ -0.21
POLR2J3Q9H1A7 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
POLR2J3Q9H1A7 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
POLR2J3Q9H1A7 SPDYE19P-201ENST00000338590 713 ntBASIC13.76□□□□□ -0.21
POLR2J3Q9H1A7 BRF1-202ENST00000379932 884 ntTSL 5 BASIC13.76□□□□□ -0.21
POLR2J3Q9H1A7 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
POLR2J3Q9H1A7 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
POLR2J3Q9H1A7 METTL26-204ENST00000397665 558 ntTSL 2 BASIC13.76□□□□□ -0.21
POLR2J3Q9H1A7 SOCS2P1-201ENST00000417727 557 ntBASIC13.76□□□□□ -0.21
POLR2J3Q9H1A7 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
POLR2J3Q9H1A7 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC13.76□□□□□ -0.21
POLR2J3Q9H1A7 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
POLR2J3Q9H1A7 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC13.76□□□□□ -0.21
POLR2J3Q9H1A7 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
POLR2J3Q9H1A7 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC13.76□□□□□ -0.21
POLR2J3Q9H1A7 HFE2-206ENST00000634927 506 ntTSL 4 BASIC13.76□□□□□ -0.21
POLR2J3Q9H1A7 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
POLR2J3Q9H1A7 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC13.76□□□□□ -0.21
POLR2J3Q9H1A7 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
POLR2J3Q9H1A7 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
POLR2J3Q9H1A7 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
POLR2J3Q9H1A7 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC13.76□□□□□ -0.21
POLR2J3Q9H1A7 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
POLR2J3Q9H1A7 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
POLR2J3Q9H1A7 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
POLR2J3Q9H1A7 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
POLR2J3Q9H1A7 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC13.76□□□□□ -0.21
POLR2J3Q9H1A7 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC13.76□□□□□ -0.21
POLR2J3Q9H1A7 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC13.76□□□□□ -0.21
POLR2J3Q9H1A7 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
POLR2J3Q9H1A7 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
POLR2J3Q9H1A7 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
POLR2J3Q9H1A7 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
POLR2J3Q9H1A7 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
POLR2J3Q9H1A7 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
POLR2J3Q9H1A7 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
POLR2J3Q9H1A7 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
POLR2J3Q9H1A7 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 55.8 ms