Protein–RNA interactions for Protein: Q5TC12

ATPAF1, ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

Predicted RBP Predictions only

Length 328 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1Q5TC12 BRI3BPP1-201ENST00000594224 787 ntBASIC12.96□□□□□ -0.33
ATPAF1Q5TC12 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC12.96□□□□□ -0.33
ATPAF1Q5TC12 GPR39-203ENST00000622084 900 ntTSL 5 BASIC12.96□□□□□ -0.33
ATPAF1Q5TC12 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC12.96□□□□□ -0.33
ATPAF1Q5TC12 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC12.96□□□□□ -0.33
ATPAF1Q5TC12 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
ATPAF1Q5TC12 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
ATPAF1Q5TC12 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC12.96□□□□□ -0.33
ATPAF1Q5TC12 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
ATPAF1Q5TC12 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
ATPAF1Q5TC12 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
ATPAF1Q5TC12 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
ATPAF1Q5TC12 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC12.96□□□□□ -0.33
ATPAF1Q5TC12 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
ATPAF1Q5TC12 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
ATPAF1Q5TC12 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
ATPAF1Q5TC12 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.34
ATPAF1Q5TC12 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
ATPAF1Q5TC12 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC12.96□□□□□ -0.34
ATPAF1Q5TC12 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
ATPAF1Q5TC12 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
ATPAF1Q5TC12 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC12.96□□□□□ -0.34
ATPAF1Q5TC12 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
ATPAF1Q5TC12 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
ATPAF1Q5TC12 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
ATPAF1Q5TC12 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
ATPAF1Q5TC12 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
ATPAF1Q5TC12 MYO16-202ENST00000356711 6874 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
ATPAF1Q5TC12 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
ATPAF1Q5TC12 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
ATPAF1Q5TC12 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC12.95□□□□□ -0.34
ATPAF1Q5TC12 FAM30A-205ENST00000630242 9612 ntTSL 2 BASIC12.95□□□□□ -0.34
ATPAF1Q5TC12 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
ATPAF1Q5TC12 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
ATPAF1Q5TC12 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC12.95□□□□□ -0.34
ATPAF1Q5TC12 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC12.95□□□□□ -0.34
ATPAF1Q5TC12 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC12.95□□□□□ -0.34
ATPAF1Q5TC12 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
ATPAF1Q5TC12 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
ATPAF1Q5TC12 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
ATPAF1Q5TC12 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC12.95□□□□□ -0.34
ATPAF1Q5TC12 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
ATPAF1Q5TC12 CDK11B-203ENST00000341832 2998 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
ATPAF1Q5TC12 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
ATPAF1Q5TC12 NHSL1-202ENST00000343505 6535 ntAPPRIS P3 TSL 5 BASIC12.95□□□□□ -0.34
ATPAF1Q5TC12 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
ATPAF1Q5TC12 OAS3-201ENST00000228928 6719 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
ATPAF1Q5TC12 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
ATPAF1Q5TC12 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
ATPAF1Q5TC12 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC12.95□□□□□ -0.34
ATPAF1Q5TC12 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
ATPAF1Q5TC12 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
ATPAF1Q5TC12 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
ATPAF1Q5TC12 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
ATPAF1Q5TC12 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
ATPAF1Q5TC12 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
ATPAF1Q5TC12 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
ATPAF1Q5TC12 MPV17-208ENST00000405076 603 ntTSL 5 BASIC12.95□□□□□ -0.34
ATPAF1Q5TC12 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
ATPAF1Q5TC12 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
ATPAF1Q5TC12 AL442647.2-201ENST00000429864 857 ntBASIC12.95□□□□□ -0.34
ATPAF1Q5TC12 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC12.95□□□□□ -0.34
ATPAF1Q5TC12 AC026410.3-201ENST00000514280 936 ntBASIC12.95□□□□□ -0.34
ATPAF1Q5TC12 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC12.95□□□□□ -0.34
ATPAF1Q5TC12 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC12.95□□□□□ -0.34
ATPAF1Q5TC12 AC123567.1-201ENST00000548294 1261 ntBASIC12.95□□□□□ -0.34
ATPAF1Q5TC12 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC12.95□□□□□ -0.34
ATPAF1Q5TC12 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
ATPAF1Q5TC12 TP53TG3HP-202ENST00000569755 579 ntBASIC12.95□□□□□ -0.34
ATPAF1Q5TC12 COX11-202ENST00000571584 1108 ntTSL 2 BASIC12.95□□□□□ -0.34
ATPAF1Q5TC12 AC138761.1-201ENST00000584393 385 ntBASIC12.95□□□□□ -0.34
ATPAF1Q5TC12 CHCHD2P3-201ENST00000603038 451 ntBASIC12.95□□□□□ -0.34
ATPAF1Q5TC12 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC12.95□□□□□ -0.34
ATPAF1Q5TC12 AL662799.1-202ENST00000614205 422 ntBASIC12.95□□□□□ -0.34
ATPAF1Q5TC12 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
ATPAF1Q5TC12 SERF2-217ENST00000630046 862 ntTSL 5 BASIC12.95□□□□□ -0.34
ATPAF1Q5TC12 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
ATPAF1Q5TC12 DGCR9-201ENST00000609630 2415 ntBASIC12.95□□□□□ -0.34
ATPAF1Q5TC12 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC12.95□□□□□ -0.34
ATPAF1Q5TC12 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
ATPAF1Q5TC12 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
ATPAF1Q5TC12 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
ATPAF1Q5TC12 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
ATPAF1Q5TC12 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
ATPAF1Q5TC12 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC12.95□□□□□ -0.34
ATPAF1Q5TC12 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC12.95□□□□□ -0.34
ATPAF1Q5TC12 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
ATPAF1Q5TC12 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
ATPAF1Q5TC12 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
ATPAF1Q5TC12 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
ATPAF1Q5TC12 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
ATPAF1Q5TC12 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
ATPAF1Q5TC12 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
ATPAF1Q5TC12 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
ATPAF1Q5TC12 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC12.94□□□□□ -0.34
ATPAF1Q5TC12 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC12.94□□□□□ -0.34
ATPAF1Q5TC12 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ATPAF1Q5TC12 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ATPAF1Q5TC12 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
ATPAF1Q5TC12 COL20A1-203ENST00000422202 8097 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms