Protein–RNA interactions for Protein: Q15768

EFNB3, Ephrin-B3, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB3Q15768 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC12.64□□□□□ -0.39
EFNB3Q15768 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC12.64□□□□□ -0.39
EFNB3Q15768 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
EFNB3Q15768 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC12.64□□□□□ -0.39
EFNB3Q15768 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
EFNB3Q15768 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
EFNB3Q15768 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
EFNB3Q15768 SNX18-202ENST00000343017 3140 ntBASIC12.64□□□□□ -0.39
EFNB3Q15768 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC12.64□□□□□ -0.39
EFNB3Q15768 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
EFNB3Q15768 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC12.63□□□□□ -0.39
EFNB3Q15768 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
EFNB3Q15768 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
EFNB3Q15768 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC12.63□□□□□ -0.39
EFNB3Q15768 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
EFNB3Q15768 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC12.63□□□□□ -0.39
EFNB3Q15768 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
EFNB3Q15768 AC004899.1-201ENST00000424687 1714 ntBASIC12.63□□□□□ -0.39
EFNB3Q15768 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
EFNB3Q15768 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC12.63□□□□□ -0.39
EFNB3Q15768 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
EFNB3Q15768 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
EFNB3Q15768 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
EFNB3Q15768 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
EFNB3Q15768 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
EFNB3Q15768 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC12.63□□□□□ -0.39
EFNB3Q15768 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
EFNB3Q15768 AC016700.1-201ENST00000429424 312 ntBASIC12.63□□□□□ -0.39
EFNB3Q15768 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
EFNB3Q15768 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC12.63□□□□□ -0.39
EFNB3Q15768 EID1-202ENST00000560490 584 ntTSL 3 BASIC12.63□□□□□ -0.39
EFNB3Q15768 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC12.63□□□□□ -0.39
EFNB3Q15768 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC12.63□□□□□ -0.39
EFNB3Q15768 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC12.63□□□□□ -0.39
EFNB3Q15768 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC12.63□□□□□ -0.39
EFNB3Q15768 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC12.63□□□□□ -0.39
EFNB3Q15768 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC12.63□□□□□ -0.39
EFNB3Q15768 AC100757.4-201ENST00000626934 759 ntBASIC12.63□□□□□ -0.39
EFNB3Q15768 OR2I1P-210ENST00000642037 4691 ntBASIC12.63□□□□□ -0.39
EFNB3Q15768 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
EFNB3Q15768 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
EFNB3Q15768 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
EFNB3Q15768 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
EFNB3Q15768 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
EFNB3Q15768 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
EFNB3Q15768 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC12.63□□□□□ -0.39
EFNB3Q15768 RER1-203ENST00000378513 3000 ntTSL 3 BASIC12.63□□□□□ -0.39
EFNB3Q15768 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC12.63□□□□□ -0.39
EFNB3Q15768 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
EFNB3Q15768 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
EFNB3Q15768 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
EFNB3Q15768 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
EFNB3Q15768 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
EFNB3Q15768 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC12.62□□□□□ -0.39
EFNB3Q15768 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
EFNB3Q15768 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
EFNB3Q15768 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
EFNB3Q15768 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC12.62□□□□□ -0.39
EFNB3Q15768 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
EFNB3Q15768 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC12.62□□□□□ -0.39
EFNB3Q15768 AMT-239ENST00000636865 1914 ntTSL 5 BASIC12.62□□□□□ -0.39
EFNB3Q15768 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC12.62□□□□□ -0.39
EFNB3Q15768 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
EFNB3Q15768 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
EFNB3Q15768 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
EFNB3Q15768 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
EFNB3Q15768 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
EFNB3Q15768 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
EFNB3Q15768 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
EFNB3Q15768 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC12.62□□□□□ -0.39
EFNB3Q15768 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
EFNB3Q15768 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
EFNB3Q15768 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
EFNB3Q15768 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
EFNB3Q15768 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
EFNB3Q15768 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
EFNB3Q15768 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
EFNB3Q15768 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
EFNB3Q15768 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
EFNB3Q15768 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
EFNB3Q15768 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
EFNB3Q15768 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
EFNB3Q15768 AC011742.3-201ENST00000439053 820 ntBASIC12.62□□□□□ -0.39
EFNB3Q15768 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC12.62□□□□□ -0.39
EFNB3Q15768 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC12.62□□□□□ -0.39
EFNB3Q15768 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
EFNB3Q15768 OARD1-204ENST00000464633 717 ntTSL 2 BASIC12.62□□□□□ -0.39
EFNB3Q15768 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC12.62□□□□□ -0.39
EFNB3Q15768 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
EFNB3Q15768 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC12.62□□□□□ -0.39
EFNB3Q15768 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC12.62□□□□□ -0.39
EFNB3Q15768 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC12.62□□□□□ -0.39
EFNB3Q15768 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC12.62□□□□□ -0.39
EFNB3Q15768 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC12.62□□□□□ -0.39
EFNB3Q15768 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
EFNB3Q15768 AC068587.8-201ENST00000641239 219 ntBASIC12.62□□□□□ -0.39
EFNB3Q15768 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
EFNB3Q15768 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC12.62□□□□□ -0.39
EFNB3Q15768 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC12.62□□□□□ -0.39
EFNB3Q15768 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms