Protein–RNA interactions for Protein: P61247

RPS3A, 40S ribosomal protein S3a, humanhuman

Known RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3AP61247 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
RPS3AP61247 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
RPS3AP61247 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
RPS3AP61247 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
RPS3AP61247 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC14.02□□□□□ -0.17
RPS3AP61247 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
RPS3AP61247 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC14.02□□□□□ -0.17
RPS3AP61247 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
RPS3AP61247 AC005034.1-201ENST00000426657 489 ntBASIC14.02□□□□□ -0.17
RPS3AP61247 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
RPS3AP61247 PNKD-204ENST00000436005 978 ntTSL 5 BASIC14.02□□□□□ -0.17
RPS3AP61247 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
RPS3AP61247 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
RPS3AP61247 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC14.02□□□□□ -0.17
RPS3AP61247 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC14.02□□□□□ -0.17
RPS3AP61247 AC092552.1-201ENST00000547243 906 ntBASIC14.02□□□□□ -0.17
RPS3AP61247 CR383656.12-201ENST00000549567 513 ntBASIC14.02□□□□□ -0.17
RPS3AP61247 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC14.02□□□□□ -0.17
RPS3AP61247 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC14.02□□□□□ -0.17
RPS3AP61247 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC14.02□□□□□ -0.17
RPS3AP61247 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC14.02□□□□□ -0.17
RPS3AP61247 AC133539.2-201ENST00000604757 467 ntBASIC14.02□□□□□ -0.17
RPS3AP61247 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC14.02□□□□□ -0.17
RPS3AP61247 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
RPS3AP61247 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC14.02□□□□□ -0.17
RPS3AP61247 SMTN-201ENST00000333137 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
RPS3AP61247 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
RPS3AP61247 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
RPS3AP61247 TGFBR3-204ENST00000465892 2908 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.17
RPS3AP61247 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
RPS3AP61247 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
RPS3AP61247 AAR2-201ENST00000320849 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
RPS3AP61247 DRD2-201ENST00000346454 2433 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
RPS3AP61247 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
RPS3AP61247 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
RPS3AP61247 ROPN1B-202ENST00000504401 2050 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
RPS3AP61247 ACE3P-201ENST00000423435 1973 ntBASIC14.02□□□□□ -0.17
RPS3AP61247 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC14.02□□□□□ -0.17
RPS3AP61247 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
RPS3AP61247 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC14.01□□□□□ -0.17
RPS3AP61247 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RPS3AP61247 CPT1C-202ENST00000323446 2783 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
RPS3AP61247 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
RPS3AP61247 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
RPS3AP61247 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
RPS3AP61247 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
RPS3AP61247 DCST2-202ENST00000368424 2392 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RPS3AP61247 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RPS3AP61247 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
RPS3AP61247 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RPS3AP61247 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
RPS3AP61247 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
RPS3AP61247 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RPS3AP61247 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RPS3AP61247 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
RPS3AP61247 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC14.01□□□□□ -0.17
RPS3AP61247 AC134915.1-201ENST00000426461 574 ntBASIC14.01□□□□□ -0.17
RPS3AP61247 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
RPS3AP61247 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC14.01□□□□□ -0.17
RPS3AP61247 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
RPS3AP61247 ELK1P1-201ENST00000485699 580 ntBASIC14.01□□□□□ -0.17
RPS3AP61247 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC14.01□□□□□ -0.17
RPS3AP61247 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC14.01□□□□□ -0.17
RPS3AP61247 RBM7-207ENST00000544582 692 ntTSL 3 BASIC14.01□□□□□ -0.17
RPS3AP61247 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC14.01□□□□□ -0.17
RPS3AP61247 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RPS3AP61247 PIGL-212ENST00000581006 554 ntTSL 4 BASIC14.01□□□□□ -0.17
RPS3AP61247 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC14.01□□□□□ -0.17
RPS3AP61247 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC14.01□□□□□ -0.17
RPS3AP61247 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC14.01□□□□□ -0.17
RPS3AP61247 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC14.01□□□□□ -0.17
RPS3AP61247 MIR8072-201ENST00000614241 80 ntBASIC14.01□□□□□ -0.17
RPS3AP61247 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
RPS3AP61247 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
RPS3AP61247 GPR132-202ENST00000392585 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
RPS3AP61247 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC14.01□□□□□ -0.17
RPS3AP61247 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC14.01□□□□□ -0.17
RPS3AP61247 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RPS3AP61247 TP53I11-222ENST00000616990 3567 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
RPS3AP61247 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC14.01□□□□□ -0.17
RPS3AP61247 ADCY8-202ENST00000377928 3363 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
RPS3AP61247 IL20RA-207ENST00000541547 3382 ntTSL 2 BASIC14.01□□□□□ -0.17
RPS3AP61247 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RPS3AP61247 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RPS3AP61247 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
RPS3AP61247 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RPS3AP61247 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC14.01□□□□□ -0.17
RPS3AP61247 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
RPS3AP61247 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RPS3AP61247 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
RPS3AP61247 C12orf43-202ENST00000445832 2397 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
RPS3AP61247 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RPS3AP61247 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RPS3AP61247 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
RPS3AP61247 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RPS3AP61247 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
RPS3AP61247 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
RPS3AP61247 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC14□□□□□ -0.17
RPS3AP61247 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
RPS3AP61247 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC14□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms