Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC13.55□□□□□ -0.24
CXCR4P61073 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC13.55□□□□□ -0.24
CXCR4P61073 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
CXCR4P61073 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC13.55□□□□□ -0.24
CXCR4P61073 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC13.55□□□□□ -0.24
CXCR4P61073 AL671883.3-201ENST00000603274 991 ntBASIC13.55□□□□□ -0.24
CXCR4P61073 GPER1-207ENST00000619052 571 ntTSL 2 BASIC13.55□□□□□ -0.24
CXCR4P61073 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC13.55□□□□□ -0.24
CXCR4P61073 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CXCR4P61073 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC13.55□□□□□ -0.24
CXCR4P61073 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC13.55□□□□□ -0.24
CXCR4P61073 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CXCR4P61073 MKRN1-201ENST00000255977 3151 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
CXCR4P61073 AC015712.2-202ENST00000560068 3213 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CXCR4P61073 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CXCR4P61073 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC13.55□□□□□ -0.24
CXCR4P61073 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
CXCR4P61073 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC13.55□□□□□ -0.24
CXCR4P61073 INMT-201ENST00000013222 2559 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
CXCR4P61073 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CXCR4P61073 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC13.55□□□□□ -0.24
CXCR4P61073 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
CXCR4P61073 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CXCR4P61073 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
CXCR4P61073 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CXCR4P61073 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC13.55□□□□□ -0.24
CXCR4P61073 TMEM63B-202ENST00000323267 3198 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
CXCR4P61073 TBC1D9B-208ENST00000519746 2755 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CXCR4P61073 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CXCR4P61073 RGS9-201ENST00000262406 2375 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
CXCR4P61073 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
CXCR4P61073 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC13.54□□□□□ -0.24
CXCR4P61073 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CXCR4P61073 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CXCR4P61073 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CXCR4P61073 ELAVL4-207ENST00000448907 1951 ntTSL 2 BASIC13.54□□□□□ -0.24
CXCR4P61073 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
CXCR4P61073 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CXCR4P61073 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC13.54□□□□□ -0.24
CXCR4P61073 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CXCR4P61073 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CXCR4P61073 UBE2F-223ENST00000612130 2135 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
CXCR4P61073 RAVER1-206ENST00000611074 3586 ntAPPRIS P2 TSL 5 BASIC13.54□□□□□ -0.24
CXCR4P61073 ACADM-202ENST00000370841 2619 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
CXCR4P61073 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC13.54□□□□□ -0.24
CXCR4P61073 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
CXCR4P61073 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CXCR4P61073 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CXCR4P61073 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CXCR4P61073 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
CXCR4P61073 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC13.54□□□□□ -0.24
CXCR4P61073 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC13.54□□□□□ -0.24
CXCR4P61073 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC13.54□□□□□ -0.24
CXCR4P61073 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC13.54□□□□□ -0.24
CXCR4P61073 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CXCR4P61073 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC13.54□□□□□ -0.24
CXCR4P61073 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC13.54□□□□□ -0.24
CXCR4P61073 AL512361.1-201ENST00000554200 418 ntBASIC13.54□□□□□ -0.24
CXCR4P61073 AC010327.4-202ENST00000591484 748 ntBASIC13.54□□□□□ -0.24
CXCR4P61073 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CXCR4P61073 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
CXCR4P61073 TMEM25-204ENST00000359862 2395 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
CXCR4P61073 MAGI3-202ENST00000369611 3596 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CXCR4P61073 SAFB-211ENST00000592224 3014 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
CXCR4P61073 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
CXCR4P61073 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC13.54□□□□□ -0.24
CXCR4P61073 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CXCR4P61073 TFEB-205ENST00000394283 2595 ntTSL 2 BASIC13.54□□□□□ -0.24
CXCR4P61073 ZBTB47-201ENST00000232974 3781 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
CXCR4P61073 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CXCR4P61073 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC13.54□□□□□ -0.24
CXCR4P61073 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
CXCR4P61073 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CXCR4P61073 SRA1-201ENST00000336283 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CXCR4P61073 AC011298.1-201ENST00000407635 3398 ntTSL 2 BASIC13.54□□□□□ -0.24
CXCR4P61073 ZNF135-205ENST00000511556 2253 ntAPPRIS P3 TSL 2 BASIC13.53□□□□□ -0.24
CXCR4P61073 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CXCR4P61073 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC13.53□□□□□ -0.24
CXCR4P61073 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CXCR4P61073 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
CXCR4P61073 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CXCR4P61073 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CXCR4P61073 KHSRPP1-201ENST00000427983 1768 ntBASIC13.53□□□□□ -0.24
CXCR4P61073 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC13.53□□□□□ -0.24
CXCR4P61073 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CXCR4P61073 NUP98-204ENST00000397004 3923 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CXCR4P61073 ARHGAP10-201ENST00000336498 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CXCR4P61073 FAM109A-201ENST00000361483 3256 ntAPPRIS ALT2 TSL 3 BASIC13.53□□□□□ -0.24
CXCR4P61073 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CXCR4P61073 PSME3-203ENST00000541124 3366 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CXCR4P61073 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CXCR4P61073 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CXCR4P61073 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CXCR4P61073 LAMP2-203ENST00000434600 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
CXCR4P61073 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC13.53□□□□□ -0.24
CXCR4P61073 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CXCR4P61073 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CXCR4P61073 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CXCR4P61073 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CXCR4P61073 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 73.9 ms