Protein–RNA interactions for Protein: P30408

TM4SF1, Transmembrane 4 L6 family member 1, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1P30408 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TM4SF1P30408 AC090340.1-201ENST00000620778 4980 ntBASIC18■□□□□ 0.47
TM4SF1P30408 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC18■□□□□ 0.47
TM4SF1P30408 PPT1-215ENST00000641471 2368 ntBASIC17.99■□□□□ 0.47
TM4SF1P30408 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
TM4SF1P30408 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TM4SF1P30408 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
TM4SF1P30408 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
TM4SF1P30408 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
TM4SF1P30408 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TM4SF1P30408 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TM4SF1P30408 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
TM4SF1P30408 SGCA-201ENST00000262018 1432 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TM4SF1P30408 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
TM4SF1P30408 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TM4SF1P30408 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
TM4SF1P30408 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TM4SF1P30408 ZEB1-AS1-208ENST00000607166 2503 ntBASIC17.99■□□□□ 0.47
TM4SF1P30408 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
TM4SF1P30408 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
TM4SF1P30408 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC17.99■□□□□ 0.47
TM4SF1P30408 AIF1L-205ENST00000372301 671 ntTSL 2 BASIC17.99■□□□□ 0.47
TM4SF1P30408 KLK11-203ENST00000391804 930 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
TM4SF1P30408 PLAC9P1-201ENST00000397540 389 ntTSL 2 BASIC17.99■□□□□ 0.47
TM4SF1P30408 NSD2-209ENST00000436793 835 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
TM4SF1P30408 LINC02435-201ENST00000508291 584 ntTSL 3 BASIC17.99■□□□□ 0.47
TM4SF1P30408 GDNF-207ENST00000515058 764 ntTSL 5 BASIC17.99■□□□□ 0.47
TM4SF1P30408 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC17.99■□□□□ 0.47
TM4SF1P30408 GOLGA2P7-209ENST00000560408 745 ntBASIC17.99■□□□□ 0.47
TM4SF1P30408 AC009163.3-201ENST00000563554 852 ntTSL 3 BASIC17.99■□□□□ 0.47
TM4SF1P30408 ACSM5-206ENST00000575584 1130 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
TM4SF1P30408 AP005212.2-201ENST00000584979 510 ntBASIC17.99■□□□□ 0.47
TM4SF1P30408 AP001269.2-201ENST00000590055 379 ntTSL 3 BASIC17.99■□□□□ 0.47
TM4SF1P30408 AL021707.6-201ENST00000609212 491 ntBASIC17.99■□□□□ 0.47
TM4SF1P30408 AC006483.2-201ENST00000609813 515 ntBASIC17.99■□□□□ 0.47
TM4SF1P30408 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
TM4SF1P30408 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC17.99■□□□□ 0.47
TM4SF1P30408 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
TM4SF1P30408 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
TM4SF1P30408 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
TM4SF1P30408 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TM4SF1P30408 ZNF576-202ENST00000391965 1468 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
TM4SF1P30408 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC17.99■□□□□ 0.47
TM4SF1P30408 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC17.99■□□□□ 0.47
TM4SF1P30408 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
TM4SF1P30408 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
TM4SF1P30408 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
TM4SF1P30408 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TM4SF1P30408 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC17.98■□□□□ 0.47
TM4SF1P30408 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TM4SF1P30408 MRPL55-205ENST00000366731 1423 ntTSL 2 BASIC17.98■□□□□ 0.47
TM4SF1P30408 AC091951.1-201ENST00000512854 2465 ntBASIC17.98■□□□□ 0.47
TM4SF1P30408 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TM4SF1P30408 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TM4SF1P30408 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TM4SF1P30408 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC17.98■□□□□ 0.47
TM4SF1P30408 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TM4SF1P30408 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
TM4SF1P30408 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TM4SF1P30408 VPS25-201ENST00000253794 1101 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TM4SF1P30408 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
TM4SF1P30408 PPM1N-205ENST00000401705 771 ntTSL 3 BASIC17.98■□□□□ 0.47
TM4SF1P30408 CCL24-202ENST00000416943 585 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TM4SF1P30408 AC018814.1-201ENST00000418972 357 ntTSL 3 BASIC17.98■□□□□ 0.47
TM4SF1P30408 TMEM222-204ENST00000466759 368 ntTSL 3 BASIC17.98■□□□□ 0.47
TM4SF1P30408 RN7SL767P-201ENST00000493013 295 ntBASIC17.98■□□□□ 0.47
TM4SF1P30408 AC023421.2-201ENST00000589510 313 ntTSL 5 BASIC17.98■□□□□ 0.47
TM4SF1P30408 AL139339.2-201ENST00000608063 657 ntBASIC17.98■□□□□ 0.47
TM4SF1P30408 ANXA8L1-206ENST00000619162 1109 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TM4SF1P30408 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC17.98■□□□□ 0.47
TM4SF1P30408 LAP3P2-201ENST00000454686 1454 ntBASIC17.98■□□□□ 0.47
TM4SF1P30408 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC17.98■□□□□ 0.47
TM4SF1P30408 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC17.98■□□□□ 0.47
TM4SF1P30408 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
TM4SF1P30408 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC17.98■□□□□ 0.47
TM4SF1P30408 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC17.98■□□□□ 0.47
TM4SF1P30408 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC17.98■□□□□ 0.47
TM4SF1P30408 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TM4SF1P30408 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TM4SF1P30408 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
TM4SF1P30408 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TM4SF1P30408 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TM4SF1P30408 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC17.98■□□□□ 0.47
TM4SF1P30408 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TM4SF1P30408 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TM4SF1P30408 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TM4SF1P30408 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC17.97■□□□□ 0.47
TM4SF1P30408 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TM4SF1P30408 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TM4SF1P30408 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TM4SF1P30408 MSANTD2P1-201ENST00000445341 1368 ntBASIC17.97■□□□□ 0.47
TM4SF1P30408 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC17.97■□□□□ 0.47
TM4SF1P30408 SNRPC-201ENST00000244520 842 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TM4SF1P30408 HIST1H2BJ-201ENST00000339812 381 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
TM4SF1P30408 LRRC75A-AS1-213ENST00000484836 821 ntTSL 2 BASIC17.97■□□□□ 0.47
TM4SF1P30408 RAMP3-203ENST00000496212 543 ntAPPRIS ALT2 TSL 4 BASIC17.97■□□□□ 0.47
TM4SF1P30408 LINC02171-201ENST00000508619 1033 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TM4SF1P30408 AC090001.1-201ENST00000553194 467 ntTSL 3 BASIC17.97■□□□□ 0.47
TM4SF1P30408 SNORD3B-1-201ENST00000577988 758 ntBASIC17.97■□□□□ 0.47
TM4SF1P30408 AP005264.6-204ENST00000588436 719 ntBASIC17.97■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 58.4 ms